Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2767 ATGGATGGTAAGGACGCATCTTCCGATCAAGTCATTGCAGAAATGTTAGAAATGGGGTTTGAATATGCCAATGTTATGGAAGCTTTGAAAGCAGTAGGTCCATCCACTAGTAGTGCTGTGGAATTTATCCTGAATAATGCTGGTAGAAATAGCGGTAGAGCATCTCCTGCCAGTACCAGTAATTCCAAATTTAACAAGGGCGGTGAGAAGGGTCTCAGAAAAAGGGACTTGGCCTCATCCCATTCCGTAACTTATGTTCGACAGTCTAGCATCCTGGACCATCTTCAAGCCTCTAATGAATTAACAAAAAGAAAGACAGATATTGTACTTGGTGTACCATTTAATAGGTTGGAAGTTCCTCCTGGTAATGTGGAAGAGCTCAAGGAGCCTTTCTCTGACATGGGTGTTGATTCCAATACCTTGTGCGGAAATTGTAAGGTTGATTCCCTGGATGAATTGGATAGTTCGTCAGATTGGGAGCAGAAAGCTAGCAATCTCTTGCAAGAGCATTTTGGCTTTTCAAGCTTGAAGAGTTTTCAAAAGGAAGCCTTGACTGCTTGGGTAACTCATACAGATTGTCTCGTCCTGGCTGCGACGGGATCTGGAAAGTCTCTGTGTTTTCAGATTCCTGCATTGCTGTCTGGGAAAGTGGTGGTTGTGATTTCACCCTTAATAAGCCTGATGCATGATCAATGCTTAAAGCTAGCAAGACATGGGATCAGTGCTTGCTTTCTTGGGTCTGGGCAACCTGATAGTACTGTTGAACAGAAAGCAATGAGAGGCATGTATAGTATAGTTTATGTATGCCCAGAGACAGTTCTGAGATTAATGGAACCACTACAGAAGCTTGCAAAAGGTCGTGGTATTGCTTTATTCGCAATTGATGAAGTGCATTGTGTTTCAAAATGGGGCCATGATTTCCGGCCAGACTACAGACGACTGTCTGCATTAAGGGAAAATTTCAGTACGAGCAAGCTAGAATTCCTGAAATTTGATATACCTCTGATGGCTTTGACTGCGACGGCTACCAACCTGGTTCGAGAGGATGTTTTAAAGTCACTACGTATGTCTAAAGAAACAAAAATTGTTCTCACCTCCTTTTTCCGGCCTAATTTACGGTTCATTGTAAGGCATAGTAAGACATCTTCATCTTCTTACGGGAAAGATTTTCATGAGCTAATTCAACTATATGGTAAAAAGCAAATGTCAGATGACAAGAAAAAAGCTTTTATACCAGAGGAATCACATGATTTTTGTATTAGCTCTGATGCCGGTAGAATCTGTGAGGTTGACAGTCTTTCTCCTTATTATGACTTGGATGGTGACCAAGATGACTACAATGAAGGAGATATCAGTGTATCGCATTCAAGAAGCACTAGTGGTGCTATAAATGGGAAAGAATTGTCAGTTGAGTACCTGGAAAACGACATTGATGTCTTTCAGAGTGTGGATGACTGGGATGTTGCCTGTGGTGAATTCTGTGCACAACCTTCTCAGAAGGAATGGAAGTTATCTGAGATTGTTGATCCGCCCAAGAAATCAGAAGAAAGACTTGGACTTCTTAATGAGCCTTTAGAGCGAGGACCAACTATCATATATGTGCCCACCAGAAAAGAAACGCTGAACATTGCAAAGTATCTATGTGAACTTGGTGTGAAGGCTGCTGCTTATAATGCATCGCTGCCCAAATCACATCTAAGAAGGGTGCACAAGGATTTTCATGAAGACACATTAGAGGTTGTCGTTGCGACAGTGGCTTTTGGAATGGGGATTGACAAATTGAATGTCAGAAGAGTCATCCATTATGGTTGGCCCCAGAGTTTAGAAGCCTATTACCAAGAAGCTGGTCGGGCTGGACGGGATGGTAACTTAGCAGATTGCGTTCTTTATGCAAATCTATCAAGGGAACCGTCACTTTTGCCTAGTCATAGAAGTGCAGATCAGTTAAAACATGCCTATGTCATGTTGTCTGATTGTTTCAGATATGGAATGAATACTTCATCTTGTAGGGCAGAGACTCTTGTGAAGTACTTTGGACAGGACTTCCATGATCAAAAGTGTCTCATATGTGATGTGTGTGTTGATGGACCACCTCAAATGCAAAATCTGAGAGAGGAGGCATGTACTTTACTACGAGCCGTAGCTGAACAGTATGGACAAAGCTCTGATGTGGATGGCTTATATGATGACGATATACATTTTGACCCTGAAGAAAGAAGAATTAAAGAGAGGCGCAGTCTCAATATGGTTGTTAGGAAGATAAGGGAGCAGTCTCAAAAATTTTTGACCACTGATATGTTATGGTGGAGAGGTCTCGCTCGAGTTATGGAACAAAAAGGATACATCAGGGAGGGAGATTATAAGAGCCATGTGCAGATTAGGTACCCGGAACCAACAGAAGTGGGATTGAAATTTGTCAAGTTAAACACAGAGCAAGCTTTCTATGTTTACCCTGAGGCAGATATGCTGCTTGCGGCGAAAAGGAACCATAGCAAGCCATACTCATCATTCTCGGATTGGGGAAAAGGTTGGGCAGATCCTGAGATTCGTCGCCAGCGGCTCCAAAGAATGCAACACAATAGGAAGTTCCGAAGTCCTAGAAAATCGCATAAGACAAAAGCTATTAGAGTGAAGCCTGATCTGAGGACTTGTCGTGGGAGGCTTGCTGCAAAACTCTCCTAA 2682 0.4251 MDGKDASSDQVIAEMLEMGFEYANVMEALKAVGPSTSSAVEFILNNAGRNSGRASPASTSNSKFNKGGEKGLRKRDLASSHSVTYVRQSSILDHLQASNELTKRKTDIVLGVPFNRLEVPPGNVEELKEPFSDMGVDSNTLCGNCKVDSLDELDSSSDWEQKASNLLQEHFGFSSLKSFQKEALTAWVTHTDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISLMHDQCLKLARHGISACFLGSGQPDSTVEQKAMRGMYSIVYVCPETVLRLMEPLQKLAKGRGIALFAIDEVHCVSKWGHDFRPDYRRLSALRENFSTSKLEFLKFDIPLMALTATATNLVREDVLKSLRMSKETKIVLTSFFRPNLRFIVRHSKTSSSSYGKDFHELIQLYGKKQMSDDKKKAFIPEESHDFCISSDAGRICEVDSLSPYYDLDGDQDDYNEGDISVSHSRSTSGAINGKELSVEYLENDIDVFQSVDDWDVACGEFCAQPSQKEWKLSEIVDPPKKSEERLGLLNEPLERGPTIIYVPTRKETLNIAKYLCELGVKAAAYNASLPKSHLRRVHKDFHEDTLEVVVATVAFGMGIDKLNVRRVIHYGWPQSLEAYYQEAGRAGRDGNLADCVLYANLSREPSLLPSHRSADQLKHAYVMLSDCFRYGMNTSSCRAETLVKYFGQDFHDQKCLICDVCVDGPPQMQNLREEACTLLRAVAEQYGQSSDVDGLYDDDIHFDPEERRIKERRSLNMVVRKIREQSQKFLTTDMLWWRGLARVMEQKGYIREGDYKSHVQIRYPEPTEVGLKFVKLNTEQAFYVYPEADMLLAAKRNHSKPYSSFSDWGKGWADPEIRRQRLQRMQHNRKFRSPRKSHKTKAIRVKPDLRTCRGRLAAKLS 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2767 893 FunFam ATP-dependent DNA helicase 504 631 - -
Mibi06g2767 893 Gene3D - 504 630 IPR027417 -
Mibi06g2767 893 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 503 668 IPR001650 -
Mibi06g2767 893 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 6 46 IPR015940 -
Mibi06g2767 893 SMART ultradead3 172 377 IPR014001 -
Mibi06g2767 893 Pfam Helicase conserved C-terminal domain 520 621 IPR001650 -
Mibi06g2767 893 MobiDBLite consensus disorder prediction 48 66 - -
Mibi06g2767 893 Gene3D - 139 368 IPR027417 -
Mibi06g2767 893 SUPERFAMILY UBA-like 8 47 IPR009060 GO:0005515
Mibi06g2767 893 MobiDBLite consensus disorder prediction 48 76 - -
Mibi06g2767 893 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 184 360 IPR014001 -
Mibi06g2767 893 FunFam ATP-dependent DNA helicase 633 811 - -
Mibi06g2767 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 632 IPR027417 -
Mibi06g2767 893 Gene3D - 635 813 IPR036388 -
Mibi06g2767 893 CDD DEXHc_RecQ 167 367 - -
Mibi06g2767 893 Gene3D - 4 47 - -
Mibi06g2767 893 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 166 395 IPR004589 GO:0004386|GO:0006310
Mibi06g2767 893 Pfam DEAD/DEAH box helicase 179 343 IPR011545 GO:0003676|GO:0005524
Mibi06g2767 893 Pfam RecQ zinc-binding 643 693 IPR032284 -
Mibi06g2767 893 SMART helicmild6 541 622 IPR001650 -
Mibi06g2767 893 FunFam ATP-dependent DNA helicase 146 368 - -
Mibi06g2767 893 PANTHER DNA HELICASE RECQ FAMILY MEMBER 152 817 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2767 Mibi-ChrMibi06 47401748 47407631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2767 499 623 Eukaryotic Initiation Factors Gene Family AT5G11170 28.800 3.15e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2767 06 47401748 47407631 Mibi06g2767 06 47401748 47407631 ECH