Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2755 ATGAGTCGCCTCTCAAGTCGTACTATTTACGTTGGCAATCTTCCCGGTGATGTTCGTTTGAGAGAGGTTGAGGATCTTTTCTACAAGTATGGTCCTATTGTTGACATTGATTTGAAAATCCCTCCAAGACCACCTGGTTATGCTTTTGTGAAGTTTGAGGATCGTCGTGATGCTGAAGACGCTATTCGCTATCGAGATGGTTATAATTTTGATGGTTTCCGATTGCGAGTTGAATTTGCACACGGGGGCCGGGGATATTCATCATCGGTTGACCGTTACAGTAGTTATAGCAGTGGTGGTGGTAGCCGTGGAGCTTCCAGGCGTTCTAATTATCGTGTTCTGGTCACTGGATTACCCCCTTCAGCTTCATGGCAAGACTTGAAGGTATGA 390 0.4564 MSRLSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVKFEDRRDAEDAIRYRDGYNFDGFRLRVEFAHGGRGYSSSVDRYSSYSSGGGSRGASRRSNYRVLVTGLPPSASWQDLKV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2755 129 Gene3D - 2 112 IPR012677 -
Mibi06g2755 129 SMART rrm1_1 8 78 IPR000504 GO:0003723
Mibi06g2755 129 MobiDBLite consensus disorder prediction 84 108 - -
Mibi06g2755 129 CDD RRM1_SF2_plant_like 8 78 - -
Mibi06g2755 129 FunFam ASF/SF2-like pre-mRNA splicing factor SRP31 1 110 - -
Mibi06g2755 129 MobiDBLite consensus disorder prediction 88 105 - -
Mibi06g2755 129 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 76 IPR000504 GO:0003723
Mibi06g2755 129 SUPERFAMILY RNA-binding domain, RBD 5 108 IPR035979 GO:0003676
Mibi06g2755 129 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 82 IPR000504 GO:0003723
Mibi06g2755 129 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 8 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2755 Mibi-ChrMibi06 47311655 47312698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2755 3 80 Eukaryotic Initiation Factors Gene Family AT3G11400 33.333 5.50e-08 48.1