Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2747 ATGGCGTGGGATGGACAAGCCAAGAAGAGAGTGGCCATCATCGCCGTCTCCACCATCTTGCTGGTGGGCATGGTGGTGGCGGTGACGGTGGGCGTGACGTGGAAGAAATCAAACTCCGGCGAGGAAGTGAAGAGCTCCGGCGACAACACGGTGGCCAACAAGGTGAAGGCAGTGCAGAGCCTGTGCGCACCCACCGACTACAGGAAAGAATGCGTGGACAACCTGGTGAAGGCCGAGGGCAACAGCACGGACCCCAAACAACTCATCATGACCGCCTTCAACATCACCATCAACCACATCCAGAAAGTTCTCCACCAGTCAGATCTCATCCACAAGGCCGAGAAGGATCCACGAGCCAAGGAAGCCCTCCAGACGTGCAAGCACCTCATGGATCTCTCCATCGGCGAGCTCAAGAGATCGCTCGACACCTTCCAGTCCTTCGATCTCAACAACTTCGAGAGGATCCTCATGAACCTCAAGGTGTGGCTCAGCGGGGCCATTACCTACCAGGAAACCTGCCTCGAAGGCTTCCAGGAGGCCAAAAGCGACGCCGGGAACAAGATGAGGGAGGCCCTCACCTCCGCCATGCACATGAGCAGCAACGGCCTCGCCATCATCAACGACATGTCCGAAGCCCTATCCAACCTCAACATCACAAAGCAGCAGCAGGGGAGACGCCTGCTAATTAACGACCGTGACGAATCAGATGACGGAGCCGCTATATTTAACGGCGACTTCGAGTTCCCGGAGTGGATCGATGAGAATCCCTCCGCTAGGAAGCTTCTGAGCAGCGCACATAAGGGGAAACTGAAGCCTAACGTGGTGGTTGCCAAGGACGGGAGCGGGAAATACAGGAAAATCAGGCACGCGCTCAAGCACGTGCCGAAGAAGAACACGAAGCCGTTCGTGATCTACATCAAGGAGGGCGTGTACGAAGAGTATGTGGAGGTGGAGAAGGACATGAAGTTCGTGGTGTTCATCGGCGACGGAGGCAACAGGACCAGAATCACCGGGAACAAGAACTTCACCGCAGGAGTGAGCACGTACAGAACCAGCACGGTGGCCGTGGAAGGGGACCACTTCATCGCCATCAACATGGGCTTCGAGAACTCCGCGGGCCCCGACGGACACCAGGCCGTGGCGGTGAGGGTCCAATCGGACCTTTCCATATTCTTCAGGTGCCATGTGGACGGTTACCAGGACACGCTTTACGCGCACACCATGCGTCAGTTCTACCGTGATTGCGTCATCAGCGGGACCATAGATTTCGTGTTCGGAGACGCCGCCGTGGTGATGCAGAACTGTACGTTCGTGGTGAGGAAGCCGAACGAGAACCAGCAGTGCATTGTGACGGCGCAGGGGAGGAAGGAGAGGCATCAGCCGTCGGCGCTGGTGATTCAGGGAGGGTCCATTGTGGCGGATGCAAAGTATTACGATGTGAGGTTCAACAACAAGGCGTATCTGGGTCGTCCATGGAAGGATTACTCGAGGACCATCATAATGGATACTTTCATTGATGATCTGATTGATCCGCAAGGGTTCCTCAAGTGGGACGCCAATTCCACCTCATACAAGACTTGCTGGTACGGTGAGTTTAACAACACGGGGCCTGGTGCTGATATGAGCCATCGCGCCAAGTGGAATGGGATCAAGAATATGACGGCTCAGCATGCTCTGGATTTCACTCCCTTGAGGTACTTCAAGAATGATTTCTGGATCAGGCAGACCAGGATCCCCTACAATCCCGGCACCATGTTCTCCCCTCTCCCTGCTACTCACAACATCACCTCCCACTGA 1797 0.557 MAWDGQAKKRVAIIAVSTILLVGMVVAVTVGVTWKKSNSGEEVKSSGDNTVANKVKAVQSLCAPTDYRKECVDNLVKAEGNSTDPKQLIMTAFNITINHIQKVLHQSDLIHKAEKDPRAKEALQTCKHLMDLSIGELKRSLDTFQSFDLNNFERILMNLKVWLSGAITYQETCLEGFQEAKSDAGNKMREALTSAMHMSSNGLAIINDMSEALSNLNITKQQQGRRLLINDRDESDDGAAIFNGDFEFPEWIDENPSARKLLSSAHKGKLKPNVVVAKDGSGKYRKIRHALKHVPKKNTKPFVIYIKEGVYEEYVEVEKDMKFVVFIGDGGNRTRITGNKNFTAGVSTYRTSTVAVEGDHFIAINMGFENSAGPDGHQAVAVRVQSDLSIFFRCHVDGYQDTLYAHTMRQFYRDCVISGTIDFVFGDAAVVMQNCTFVVRKPNENQQCIVTAQGRKERHQPSALVIQGGSIVADAKYYDVRFNNKAYLGRPWKDYSRTIIMDTFIDDLIDPQGFLKWDANSTSYKTCWYGEFNNTGPGADMSHRAKWNGIKNMTAQHALDFTPLRYFKNDFWIRQTRIPYNPGTMFSPLPATHNITSH 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2747 598 Pfam Pectinesterase 273 569 IPR000070 GO:0030599|GO:0042545
Mibi06g2747 598 FunFam Pectinesterase 54 210 - -
Mibi06g2747 598 SUPERFAMILY Pectin lyase-like 271 582 IPR011050 -
Mibi06g2747 598 TIGRFAM PME_inhib: pectinesterase inhibitor domain 50 209 IPR006501 GO:0004857
Mibi06g2747 598 SMART PMEI_2 53 205 IPR006501 GO:0004857
Mibi06g2747 598 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
Mibi06g2747 598 FunFam Pectinesterase 267 584 - -
Mibi06g2747 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Mibi06g2747 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 210 IPR035513 -
Mibi06g2747 598 CDD PMEI-like_3 60 210 - -
Mibi06g2747 598 PANTHER PECTINESTERASE 18 574 - -
Mibi06g2747 598 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Mibi06g2747 598 Gene3D - 267 584 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2747 Mibi-ChrMibi06 47290582 47292378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2747 4 585 Carbohydrate Esterase AT3G05610 48.199 0.0 578