Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2745 ATGGCCCATCATCCCATTCATCATTTCCTTTTCATTCTCATTATCCTTTTACCTTCCCTCAACACCATCGAAGCTTTCCCAGACGAAATCCCCTCCGACACAACAAGAAACAAGTTAGACCTACACGCCATGATAGCCCAAGTATGCATGGACGTGGAAGACCAAAACACATGCCTCTCCAATATCCAAAACGACGTCGTCAAGCACGGCCCTCCCACCCCATCCTCCGTGGTCACCGCCGCAATCCGAGCCACACTCAACGAAGCAGTGGGAGCCATTGACAAGATCTCAAAGTTCAGCACTTTCTCCATCAGCTACCGCGAGCAAGTAGCCATCCAAGACTGCAAGGAGCTCCTTGACTTCTCTGTCTCCGAGCTCGCATGGTCCCTCGGCGAGATGCGAAGAATCCGCTCCGGCGACGACGGCGTTGATTACGACGGCGACCTCCAAGCCTGGCTCAGCGCCGCCCTCAGCAACCAGGACACGTGTCTCGAGGGCTTCGAGGGTACCGACCGACGTCTTCAGAGTTACATAAGCGGAAGCCTGACACAGGTGTCACAGCTTATAAGTAACGTTTTGGGACTATACACTCAATTGCATAGCTTACCATTCAGGCCTACGGGGAACAAAACAAGAATAGAATATGATGGTGATGATGATGATGATGGGAGGACGACGGAGTTTCCGGCGTGGATGACGGAGGGAGATAAGGAGATGCTGAGATCTCGGCCGAGAGGGGTTCGTGCGGATGCGGTGGTGGCGTTGGATGGGAGTGGACAGTACAGTTCGATATCGGAGGCTGTGGATGCGGCTCCCAGTCAGAGCAAGAGGCGGTATGTTATTTACGTGAAAAGTGGGCTTTATAGAGAGAATGTAGACTTGAAGAGGAAGAAGACCAACATCATGCTCGTTGGTGAAGGTATTGGCAAGACCATCATCACAGGCAACCGCAATTTCATGCAAGGATGGACTACTTTCCGCACCGCCACTGTTGCTGTGTCGGGGAAGGGATTCATAGCGAGGGACATGTCATTTAGGAACACGGCAGGGCCAGAGAACCATCAGGCGGTGGCTCTAAGGGTGGATTCCGACCAATCAGCATTCTACAGGTGCAGCATAGAAGGTCACCAAGACACACTATACGCACACTCCCTCAGACAATTCTACAGAGAATGTGAAATCTATGGCACCATAGACTTCATATTCGGGAACGGAGCCGCCGTGCTGCAGAATTGCAAGTTATACACAAGAGTGCCACTGCCATTGCAGAAGGTGACCATAACGGCACATGGAAGAAAAAGCCCACACCAGAGCACTGGGTTTATAATACAGGATAGCTTTATTTTGGCCACTCAACCAACTTATTTGGGCAGGCCATGGAAGCCATTTTCCAGGACGGTGTACATGAACACTTACATGAGTGGGCTTGTGCAGCCACGAGGGTGGCTGGAGTGGGCAGGCAATTTTGCGTTGAACACATTGTGGTACGGAGAGTATAAGAACTATGGACCTGGTTCTGGGCTGGGCGGAAGGGTGAGGTGGCCTGGTTTTCATGTTATTAGAGACGCCGCCGCCGCCAACTTCTTCACCGTTCAGAACTTCATTGATGGCACCTCCTGGTTGCCCGCCACCGGAGTAAAGTTCACCGCTGGTTTGACCGATTGA 1665 0.5195 MAHHPIHHFLFILIILLPSLNTIEAFPDEIPSDTTRNKLDLHAMIAQVCMDVEDQNTCLSNIQNDVVKHGPPTPSSVVTAAIRATLNEAVGAIDKISKFSTFSISYREQVAIQDCKELLDFSVSELAWSLGEMRRIRSGDDGVDYDGDLQAWLSAALSNQDTCLEGFEGTDRRLQSYISGSLTQVSQLISNVLGLYTQLHSLPFRPTGNKTRIEYDGDDDDDGRTTEFPAWMTEGDKEMLRSRPRGVRADAVVALDGSGQYSSISEAVDAAPSQSKRRYVIYVKSGLYRENVDLKRKKTNIMLVGEGIGKTIITGNRNFMQGWTTFRTATVAVSGKGFIARDMSFRNTAGPENHQAVALRVDSDQSAFYRCSIEGHQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKLYTRVPLPLQKVTITAHGRKSPHQSTGFIIQDSFILATQPTYLGRPWKPFSRTVYMNTYMSGLVQPRGWLEWAGNFALNTLWYGEYKNYGPGSGLGGRVRWPGFHVIRDAAAANFFTVQNFIDGTSWLPATGVKFTAGLTD 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2745 554 SMART PMEI_2 40 195 IPR006501 GO:0004857
Mibi06g2745 554 FunFam Pectinesterase 42 201 - -
Mibi06g2745 554 Pfam Plant invertase/pectin methylesterase inhibitor 44 194 IPR006501 GO:0004857
Mibi06g2745 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 200 IPR035513 -
Mibi06g2745 554 CDD PMEI-like_3 57 201 - -
Mibi06g2745 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 42 200 IPR006501 GO:0004857
Mibi06g2745 554 Pfam Pectinesterase 250 537 IPR000070 GO:0030599|GO:0042545
Mibi06g2745 554 PANTHER PECTINESTERASE 20 542 - -
Mibi06g2745 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 200 IPR035513 -
Mibi06g2745 554 SUPERFAMILY Pectin lyase-like 247 551 IPR011050 -
Mibi06g2745 554 Gene3D - 245 552 IPR012334 -
Mibi06g2745 554 FunFam Pectinesterase 244 552 - -
Mibi06g2745 554 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2745 Mibi-ChrMibi06 47274030 47276071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2745 12 554 Carbohydrate Esterase AT3G05620 59.747 0.0 679