Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2737 ATGGCGACGAGGAACCGTACTTTGCTCTATAGGAAGTACAGAGATGCATTGAAGAGTGTTCGGGTTCCGTCGAGTTCTACGGCCTCCACGAGTTCCGCCGGCGGTGGCGGCGGACCGGTGATTGAATTGGTCAACACGTCGCTTCTGAATCAGAATCGTTCTTATGCTCCGCTTAGCACCGAGGATCCTGGCAATTCAAGCAAGGGTCCACTTACCGTAGGACTACCTCCAGCTTGGGTGGATGTATCTGAAGAAATATCAGCAAATGTGCAACGTGCTCGTACAAAGATGGCAGAGTTGGCCAAAGCTCATGCAAAGGCTTTAATGCCGTCATTTGGAGATGGTAAGGAGGAACAACGAGCCATTGAAACTCTAACTCATGAGATAACTGACCTGATAAAAAGATCAGAGAGGCGACTGCAGAGACTTTCTGCTACTGGGCCTTCTGAGGATTCCGGTGTGAGGAAGAACGTGCAGCGTTCTCTGGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGGCTTAGACAGCAAAAGGAGGTGGGTCAAGATGGGGTGGATCTAGAGATGAGCATTAATGGAAGTGTATCCAGATTTGAAGATGATCCTTTGGACAATATGGTGTTTAACGAGCATCAGATGGCGAAGTTGAAAAAAAGTGAAGCATTCACAGTAGAAAGGGAAAAAGAGATCCAACAGGCAAGCAAAAAGTTCCTTTTTGCTGTTGTGGAATCAGTAAACGAGCTTGCCCAAATTATGAAAGATTTGTCTGTTCTAGTTATAGACCAGGGAACCATTGTTGATCGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGAGGATGGCCTTAAACAGTTGCAGAAGGCTGAGAGAACACAGAAAAAGGGGGGCATGGTGACTTGTGCGACGGTGCTTATTATCATGTGTTTCATTATGCTTGTTCTCTTAATCCTGAAGGAAATACTTTTGTGA 1005 0.4567 MATRNRTLLYRKYRDALKSVRVPSSSTASTSSAGGGGGPVIELVNTSLLNQNRSYAPLSTEDPGNSSKGPLTVGLPPAWVDVSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEEQRAIETLTHEITDLIKRSERRLQRLSATGPSEDSGVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKEVGQDGVDLEMSINGSVSRFEDDPLDNMVFNEHQMAKLKKSEAFTVEREKEIQQASKKFLFAVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVTCATVLIIMCFIMLVLLILKEILL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2737 334 FunFam Syntaxin-43 76 292 - -
Mibi06g2737 334 CDD SNARE_syntaxin16 235 299 - -
Mibi06g2737 334 SMART tSNARE_6 225 300 IPR000727 -
Mibi06g2737 334 SUPERFAMILY t-snare proteins 75 293 IPR010989 GO:0016020|GO:0016192
Mibi06g2737 334 Gene3D - 76 292 - -
Mibi06g2737 334 Pfam SNARE domain 274 326 IPR000727 -
Mibi06g2737 334 SMART SynN_4 70 185 IPR006011 GO:0016020
Mibi06g2737 334 Coils Coil 83 103 - -
Mibi06g2737 334 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 238 300 IPR000727 -
Mibi06g2737 334 PANTHER SYNTAXIN 82 321 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2737 Mibi-ChrMibi06 47198876 47201971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2737 1 334 SNARE and Associated Proteins AT5G26980 75.150 0.0 502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2737 06 47198876 47201971 Mibi06g2737 06 47198876 47201971 ECH
Mibi02g0402 02 4049369 4054116 Mibi06g2737 06 47198876 47201971 ECH