Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2735 ATGCAGGAATCTTCGTCGGATGAATCCTGCGACATCAATAAGTGCTGCACTGATTGCAAAACCACTAAAACCCCACTCTGGAGGGGAGGGCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAAGAAGAAAAGGGCTTCTCAGGTGAGATTGAACAAAGGGCTAGATGGGAAAAGAGAACGAGCCGTTAATGATAATCAGTTGAGGGAATCGTTGGAAATGAACATGATAGGATTGGGTGAGAGGCTTTTGTTGCAGAATGTGCCAGCGGTTTTGAAGAAACAGAGATGCCAGAGGAAAAGGAAGTTAGGGGAAGTGGAGGAAGCGGCTTTCTGTTTGATGGCATTATCCTGTGGCTTTTTCTTTAGCTCTGTGAAGCGAAATCCCCTTGGTTCATCTAACTGGGGTATGAAGCAAAGCAAGGATGAGTCTGTTTGCGGGATAAGAACTAAGAAGTCAAGGCTAAGGAAAGTAAATGCCATAGGAATTAGGAATTAAAAATGGGTTGAGTGGAGTAGAAGAGAACGCACATCGAGCAAGGCGATCCGAAAGTTACGTTGTCGATGGGCGCATGGTTGCCCAGTTTTCCGATATTCCTTCTCGGCTTCTCGCTCCACATGTTCTCTTGTTCCTTTTTCTTCTCCACTCCTCTCTTTCTCGCCTATAAGTAAATGGGGGACCTTCATTCTGATTTCAAGCTTATTGCTTTTCTCTGTCTTCTGCCCCCTTCAGGCAATTGCACAAGGCAATAACCTCTATTTAAAAGGTTGTAGCTGCTGGCTCATGAAGTGA 804 0.4577 MQESSSDESCDINKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYKKKRASQVRLNKGLDGKRERAVNDNQLRESLEMNMIGLGERLLLQNVPAVLKKQRCQRKRKLGEVEEAAFCLMALSCGFFFSSVKRNPLGSSNWGMKQSKDESVCGIRTKKSRLRKVNAIGIRNXKWVEWSRRERTSSKAIRKLRCRWAHGCPVFRYSFSASRSTCSLVPFSSPLLSFSPISKWGTFILISSLLLFSVFCPLQAIAQGNNLYLKGCSCWLMK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2735 267 Gene3D - 11 55 IPR013088 GO:0006355|GO:0008270
Mibi06g2735 267 SMART GATA_3 10 62 IPR000679 GO:0006355|GO:0043565
Mibi06g2735 267 PANTHER OS01G0976800 PROTEIN 5 126 - -
Mibi06g2735 267 CDD ZnF_GATA 16 49 IPR000679 GO:0006355|GO:0043565
Mibi06g2735 267 ProSiteProfiles GATA-type zinc finger domain profile. 16 46 IPR000679 GO:0006355|GO:0043565
Mibi06g2735 267 ProSitePatterns GATA-type zinc finger domain. 16 41 IPR000679 GO:0006355|GO:0043565
Mibi06g2735 267 Pfam GATA zinc finger 16 49 IPR000679 GO:0006355|GO:0043565
Mibi06g2735 267 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 9 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2735 Mibi-ChrMibi06 47191612 47195916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2735 1 127 C2C2-Gata Transcription Factor Family AT5G49300 44.882 8.61e-25 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi06g2735 GATA 3.7e-17 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2735 06 47191612 47195916 Mibi06g2735 06 47191612 47195916 ECH