Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2734 ATGTCGTATCGCCCTACTGGTAACTCCAGGACCGAGGTCCGTCGGAATCGGTACAAGGTGGCCGTAGATGCCGAGGAGGGTCGCAGACGTCGGGAGGATACCATGGTCGAGATCCGGAAGAACCGTAGAGAAGAGAGTTTGCAGAAGAAGAGGCGCGAGGGCCTTCAAGCTCAGCAGATGCCTGCTTCCTTAAACACTACTGCCGTAGAGAAGAAGTTGGAACATCTGCCAGCCATGGTTACAGGCGTTTGGACAGATGATCACAACCTGCAGCTCGAGTCGACAACTCAGTTCCGGAAGTTGCTTTCAATTGAGCGTAGCCCGCCTATTGAGGAGGTTATTCAAGCTGGTGTAGTCCCTCGTTTCGTTGAGTTTTTGATGAGAGAAGATTTTCCCCAGTTGCAGTTTGAGGCAGCTTGGGCTTTGACGAATATAGCTTCTGGAACATCTGACAATACTAAAGTGGTGATCGATCATGGTGCTGTCCCAATTTTCGTCAAACTCCTTGGTTCTCCAAGCGACGATGTCCGCGAACAGGCTGTGTGGGCATTAGGAAATGTTGCTGGGGATTCTCCCAGATGCCGTGATCTTGTTCTCAGTCATGGGGCCTTGGTTCCTCTGCTGACACAGTTGAATGAGCAAGCAAAGCTATCTATGCTCAGAAATGCTACCTGGACGCTTTCTAATTTCTGCAGGGGCAAGCCACAACCTCCTTTTGAACAGGTAAAACCTGCACTCCCTGCTCTTGCACGTCTTATTCACTCAAATGATGAAGAAGTCTTGACTGATGCTTGCTGGGCACTTTCATATCTTTCTGATGGTACAAATGACAAAATTCAAGCTGTAATTGAAGCTGGCGTATGTGCACGGCTCGTTGAGCTTTTGCTGCATCCATCCCCTTCTGTGCTTATTCCTGCTCTTCGTACCGTTGGAAATATTGTCACCGGAGATGATATGCAAACCCAGGTTATAATCCACCATCAAGCACTTCCTTGTCTTTTGAATCTATTAACAAACAACTATAAAAAAAGCATAAAGAAGGAAGCCTGTTGGACCATATCAAATATCACAGCTGGGAATAAACAGCAGATTCAGGCTGTAATCGAGGCTAATTTAATTGGTCCTCTCGTCCAACTTCTTCAAAATGCTGAGTTTGATATTAAGAAAGAGGCAGCTTGGGCTGTCTCAAATGCTACATCTGGTGGAGCTCACGATCAAATCAAGTACCTAGTAAGTGAGGGGTGTATTAAGCCCTTATGTGATCTTCTCATTTGCCCTGATCCTAGAATCGTGACCGTTTGTCTGGAGGGGCTTGAAAACATCTTGAAGGTGGGAGAAGCTGATAAAAACATGGGTAACAATGGGGGTGTAAATCTATATGCCCAACTGATTGATGATGCTGAGGGTTTGGAGAAAATTGAGAATCTACAGAGTCATGATAACACAGAGATTTATGAGAAGGCAGTAAAAATTCTGGAGACATATTGGTTGGAGGAAGAAGATGAGACTATGCCTCCAGGGGATGCTTCCCAGTTAGGGTTCAACTTTGGTGGTGGCTCTGAGGTTCATGCCGTGCCTTCTGGGGGATTCAACTTTAATTGA 1602 0.4632 MSYRPTGNSRTEVRRNRYKVAVDAEEGRRRREDTMVEIRKNRREESLQKKRREGLQAQQMPASLNTTAVEKKLEHLPAMVTGVWTDDHNLQLESTTQFRKLLSIERSPPIEEVIQAGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSDNTKVVIDHGAVPIFVKLLGSPSDDVREQAVWALGNVAGDSPRCRDLVLSHGALVPLLTQLNEQAKLSMLRNATWTLSNFCRGKPQPPFEQVKPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCARLVELLLHPSPSVLIPALRTVGNIVTGDDMQTQVIIHHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVIEANLIGPLVQLLQNAEFDIKKEAAWAVSNATSGGAHDQIKYLVSEGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKNMGNNGGVNLYAQLIDDAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEEDETMPPGDASQLGFNFGGGSEVHAVPSGGFNFN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2734 533 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Mibi06g2734 533 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 160 202 IPR000225 GO:0005515
Mibi06g2734 533 FunFam Importin subunit alpha 74 497 - -
Mibi06g2734 533 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 286 IPR000225 GO:0005515
Mibi06g2734 533 FunFam Importin subunit alpha 13 52 - -
Mibi06g2734 533 SUPERFAMILY ARM repeat 10 501 IPR016024 -
Mibi06g2734 533 Gene3D - 74 497 IPR011989 -
Mibi06g2734 533 PIRSF Importin_alpha 6 532 IPR024931 GO:0005737|GO:0006606|GO:0061608
Mibi06g2734 533 Pfam Importin beta binding domain 14 96 IPR002652 GO:0006606|GO:0061608
Mibi06g2734 533 PANTHER IMPORTIN ALPHA 14 502 - -
Mibi06g2734 533 Gene3D - 12 52 IPR036975 GO:0006606
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 107 147 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 245 272 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 405 441 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 360 399 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 149 188 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 276 314 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 191 232 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Armadillo/beta-catenin-like repeat 318 358 IPR000225 GO:0005515
Mibi06g2734 533 Pfam Atypical Arm repeat 458 504 IPR032413 -
Mibi06g2734 533 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 160 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 106 147 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 190 232 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 234 273 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 360 400 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 403 443 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 317 358 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 275 315 IPR000225 GO:0005515
Mibi06g2734 533 SMART arm_5 149 189 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2734 Mibi-ChrMibi06 47185555 47189830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2734 132 392 U-box Gene Family AT3G46510 25.287 2.84e-12 67.4