Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2715 ATGGCATCTTTGGAATCAATGGCGGATCCTATTAGTTCAGAGACGTACCAAGAAGGCAATCAGAGAAAGCGAAGGAAAATCGGACAGGAGGCGAGCAACGATCAGAGTTCGCTCGCTCAGATTCCGTGGAGATCGGAGGCAGAGCAGCGGATCTACTCCTCCAAACTCGCGGAAGCTCTCCGCCGCGTTCTCCGCCAGGGTTCTCCTTCTCCGGCGAGGCCTCGCGTCCGTGAGATCGCAGACAGGGTTCTGGCAGTGAGAGCGAAAGGCAGGAGCAGGTGGAGCCGTGCAATACTCGGTCGAAGAAAGTTGCAGAAGAAGCATAAGAAGGTGAAGAAGGGATGGAAGAAAGGGGAGGTTAGGAGAGAGAGAAAAAGGCTTCCGGTTGTGCAGAGGAAGGCAAGAGTTCTGGGGAGATTAGTTCCTGGTTGCCGGAAGGCCTCTTTTCCGAGCCTTCTGGAAGAAACCACTGATTACATTTCTGCCTTGCAAATGCAAGTTCGAGCCATGACTGCACTCACCGACTTGCTTGCAGGTCGGCCTCCACCGTGA 552 0.5435 MASLESMADPISSETYQEGNQRKRRKIGQEASNDQSSLAQIPWRSEAEQRIYSSKLAEALRRVLRQGSPSPARPRVREIADRVLAVRAKGRSRWSRAILGRRKLQKKHKKVKKGWKKGEVRRERKRLPVVQRKARVLGRLVPGCRKASFPSLLEETTDYISALQMQVRAMTALTDLLAGRPPP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2715 183 MobiDBLite consensus disorder prediction 1 17 - -
Mibi06g2715 183 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 163 IPR011598 GO:0046983
Mibi06g2715 183 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 177 IPR044660 GO:0006355
Mibi06g2715 183 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 116 179 IPR036638 GO:0046983
Mibi06g2715 183 Gene3D - 102 180 IPR036638 GO:0046983
Mibi06g2715 183 CDD bHLH_AtIBH1_like 121 174 IPR044549 GO:0006355
Mibi06g2715 183 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2715 Mibi-ChrMibi06 47044743 47045294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2715 12 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 42.623 1.05e-33 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0248 02 2485790 2486356 Mibi06g2715 06 47044743 47045294 CCT
Mibi06g2715 06 47044743 47045294 Mibi06g2715 06 47044743 47045294 ECH
Mibi02g0248 02 2485790 2486356 Mibi06g2715 06 47044743 47045294 ECH