Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2704 ATGAAGGCCGGGCAAGCAATGGTGTTAGGAACTATTGTGGGTGTAGGTGAAGCTCTTTTTCTATCATTTTACAATGGCAAAGCCATAAATATAGGCCCATCTGGGATTCACTGGGAATATGCAGAGAAAGTTGGACGATTAAGCTCCATCTCCGGAACAAATTCGTTGTTTGGTCCTGCCTTAGTGATTGGGAGCGCTCTTGTTTGGGCTCCATGGTTCATAGTCAAAGGGAACTTGTGCAAGAAGTATCCAGCTCCTTACAAGAGCACCACTTACATGTGTTTTTTGGCAAGTATACAATGTGGGGTCATTGCTTTGTGTTTTGAACGCAAACCCTCGGCTTGGTCACTCGCCAACTCTGTTAGACTCACATCTCTGTACTTTTTGCGTACACCTGTGTTCTCACTTCTCAAACAACTTGTACGGGTTCTCCTTCGACGGCTCATTCTTCATCTCCGTCCTCTCCAATTCCATCTCCCTGTGTCCTCCATCTTAAGTAAAGAGATGGGGCTGTCTTTCACCAAACTGTTTAGCCGACTCTTTGCAAAGAAAGAGATGCGAATTCTCATGGTTGGTCTTGATGCTGCTGGTAAGACCACCATCTTGTACAAGCTCAAGCTAGGAGAGATCGTGACAACCATTCCTACAATCGGATTTAATGTGGAGACTGTGGAATACAAAAATATTAGCTTCACGGTCTGGGATGTAGGAGGCCAAGACAAGATTCGTCCTCTATGGAGACACTACTTCCAAAATACCCAGGGGCTTATCTTTGTGGTTGATAGCAACGATCGTGATCGTGTTGTTGAGGCTAGAGATGAGCTCCACCGGATGTTGAATGAGGATGAGTTAAGAGATGCGGTGCTGCTTGTATTTGCCAACAAGCAAGATCTTCCAAATGCCATGAATGCTGCAGAAATTACGGACAAACTTGGTCTTCATTCCCTTCGTCAGCGCCACTGGTATATCCAAAGCACATGTGCCACTTCTGGGGAAGGACTCTACGAAGGACTGGACTGGCTTTCCAATAACATAGCCAACAAGGCTTAA 1050 0.4562 MKAGQAMVLGTIVGVGEALFLSFYNGKAINIGPSGIHWEYAEKVGRLSSISGTNSLFGPALVIGSALVWAPWFIVKGNLCKKYPAPYKSTTYMCFLASIQCGVIALCFERKPSAWSLANSVRLTSLYFLRTPVFSLLKQLVRVLLRRLILHLRPLQFHLPVSSILSKEMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2704 349 ProSiteProfiles small GTPase Arf family profile. 179 345 - -
Mibi06g2704 349 CDD Arf1_5_like 186 344 IPR045872 GO:0003924
Mibi06g2704 349 Pfam ADP-ribosylation factor family 173 345 IPR006689 GO:0003924|GO:0005525
Mibi06g2704 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 347 IPR027417 -
Mibi06g2704 349 TIGRFAM small_GTP: small GTP-binding protein domain 184 320 IPR005225 GO:0005525
Mibi06g2704 349 Gene3D - 172 349 IPR027417 -
Mibi06g2704 349 SMART arf_sub_2 169 349 - -
Mibi06g2704 349 SMART sar_sub_1 169 345 IPR006689 GO:0003924|GO:0005525
Mibi06g2704 349 PRINTS GTP-binding SAR1 protein signature 242 267 IPR006689 GO:0003924|GO:0005525
Mibi06g2704 349 PRINTS GTP-binding SAR1 protein signature 187 210 IPR006689 GO:0003924|GO:0005525
Mibi06g2704 349 PRINTS GTP-binding SAR1 protein signature 287 308 IPR006689 GO:0003924|GO:0005525
Mibi06g2704 349 PRINTS GTP-binding SAR1 protein signature 215 239 IPR006689 GO:0003924|GO:0005525
Mibi06g2704 349 SMART rab_sub_5 186 348 - -
Mibi06g2704 349 FunFam ADP-ribosylation factor 1 169 349 - -
Mibi06g2704 349 PANTHER ADP RIBOSYLATION FACTOR-RELATED 169 344 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2704 Mibi-ChrMibi06 46978381 46984635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2704 3 125 Nodulin-like Gene Family AT1G09380 46.774 6.01e-31 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2704 06 46978381 46984635 Mibi06g2704 06 46978381 46984635 ECH