Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2700 ATGGCGTCAGTTGGTGTAGCACCAACGTCAGGGGTAAGAGAACCCACTGGTCATTCAGCGGCAGGTGTTGATAGACTGCCTGAGGAGATGAACGATATGAGAATTAGGGACGATAAAGAAATGGAAGCCGCTGTTGTTGATGGTAATGGAACGGAGGCCGGTCACATTATTGTCACAACCATTGGGGGTAGAAATGGTCAGCCAAAACAGACGATAAGCTATATGGCAGAGCGTGTTGTGGGGCACGGATCATTTGGAGTTGTCTTTCAGGCAAAGTGCTTGGAGACTGGTGAAACTGTTGCTATAAAAAAGGTTCTTCAAGACAAAAGGTACAAGAACAGGGAGCTGCAAACAATGCGTCTCCTTGACCACCCAAATGTTGTCTCTTTGAAGCATTGTTTCTTTTCTACAACTGAAAGGGATGAATTATACCTTAATTTGGTGCTTGAGTATGTTCCTGAAACTGTTCATCGTGTGATCAAACATTACAACAAGTTGAATCAGAGGATGCCGTTGATATATGTTAAACTCTACACATACCAGATCTTTAGGGCATTATCTTATATTCACCGGTGTATTGGAGTCTGTCATCGGGATATCAAACCCCAAAATCTGTTGGTCAATCCTCACACCCACCAGGTTAAATTATGTGACTTTGGGAGTGCCAAAGTGTTGGTGAAAGGGGAACCAAATATTTCATACATATGTTCCAGATATTACAGAGCTCCTGAGCTTATATTTGGAGCAACTGAGTACACTTCGGCCATTGACATCTGGTCTGCTGGTTGCGTTTTGGCTGAGTTGCTTCTTGGACATCCTTTATTTCCTGGTGAGAGTGGAGTTGATCAACTTGTTGAGATCATCAAGGTTTTGGGTACTCCAACAAGGGAAGAGATTAAGTGCATGAATCCTAACTATACAGAATTCAAATTCCCTCAGATAAAAGCTCATCCGTGGCACAAGATTTTTCATAAGCGTATGCCTCCAGAAGCTGTTGATCTGGTTTCTAGACTACTACAATACTCCCCTAATCTACGGTGCTCAGCTTTGGATGCCTTGACTCATCCTTTTTTTGATGAACTTCGTGATCCAAACACTCGGTTGCCAAATGGACGCTTCCTCCCGCCACTATTCAATTTCAAATCTCATGAATTGAAGGGGGTTCCAGCAGAAATACTCGTGAAGTTAATTCCAGAGCATGCGAGGAAGCAATGCCCGTTTCTTGGGTTGTGA 1233 0.4339 MASVGVAPTSGVREPTGHSAAGVDRLPEEMNDMRIRDDKEMEAAVVDGNGTEAGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTERDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTSAIDIWSAGCVLAELLLGHPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCSALDALTHPFFDELRDPNTRLPNGRFLPPLFNFKSHELKGVPAEILVKLIPEHARKQCPFLGL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2700 410 MobiDBLite consensus disorder prediction 1 30 - -
Mibi06g2700 410 Gene3D Transferase(Phosphotransferase) domain 1 154 402 - -
Mibi06g2700 410 FunFam Glycogen synthase kinase-3 beta 58 153 - -
Mibi06g2700 410 Pfam Protein kinase domain 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2700 410 SUPERFAMILY Protein kinase-like (PK-like) 73 384 IPR011009 -
Mibi06g2700 410 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2700 410 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Mibi06g2700 410 Gene3D Phosphorylase Kinase; domain 1 58 153 - -
Mibi06g2700 410 SMART serkin_6 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2700 410 FunFam Shaggy-related protein kinase kappa 154 402 - -
Mibi06g2700 410 CDD STKc_GSK3 69 361 IPR039192 -
Mibi06g2700 410 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 38 404 - -
Mibi06g2700 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2700 Mibi-ChrMibi06 46938561 46941805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2700 74 367 MAP Kinase Gene Family AT1G73670 38.978 1.91e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mibi06g2700 Pkinase 2.5e-64 CL0016