Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2690 ATGGGAAGGCATTCTTGCTGTTACAAGCAAAAGCTGAGGAAAGGCCTCTGGTCACCAGAGGAAGACGAGAAGCTTCTCAATTATATCACCAAGCATGGCCATGGATGTTGGAGTTCTGTCCCCAAACTAGCTGGCTTGCAGAGATGTGGCAAGAGCTGCAGATTGAGGTGGATAAATTATCTGAGGCCTGATTTGAAGAGAGGAGCATTCTCCCAACAGGAAGAAAATTTGATTATTGAGATCCATGCAGCATTAGGAAACAGGTGGTCTCAAATTGCAGCCCAATTACCGGGAAGAACCGACAACGAGATAAAGAACCTATGGAATTCCTGCCTGAAAAAGAAGCTCAGGCAAAGAGGCATTGACCCAAACACCCACAAACCTCTCTCTGAGGTTGACAACCACAAGGACAAGCCTTCCTCCACCGACAGAACCAATCAGAAAACCTCAGTATTGTTCAATGAACACAGTTTGGCTCATGACTCAACAAAATCAAAACCTGCACAACTATACCCTCCTCTTCAAGTTTCATCCCCCTCCAACTTCAACAATAGCAACAATAATAATTGCACTGATCCGTTCCTGGATAGGTCTTCTTCTGATGTTGTGGGTTATTTCTCTTTCCAACCCTTCAACAACTATGCAACAAATCAAGACACCAGTACTTCTCTTTGCTTCATCCCTAGCTCTTCCACTTCCTCTCAGGTTATGTCAGCCCTTAATTCTGCTGTAACCCCCACTATGCTCCAATCAATTTTGCCTGCAAATGCAAATCCCACTCTTAGCCTCCAATCTGATAACAACCCCTCTGCTCATATTCATGGTGTTCAGGCATGGGAAGCCACTGCCTTTAGTAACAATGGAAGTAAAAATAGTGGGGGCAATAGTGATATACCATTACAAAAGTACAGCAATAACTTCATGGAGAACAACACTTTAACGTGGGAGAAGAATTCCCATGTTAACGTGGTACCCGTACAAGCAGAACAAGATGACATAAAATGGTCTGAGTATCTTAATACCCCATTTTTTCTGGGCAATCAAATCTCTCAATCTATCTACAGTGAGGTAAAACCAGAAATGGGGTTCATAACAGATGAGGCGACTACAAGTTGGCACCATAATAGCCAGCAGCACCCGCAAGTTTTCCAAGGTTCAGATATATATAACAAGGATATGCAGAGATTTTCACTGGCTTTTGGACAAACGCTTTAG 1215 0.4329 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEENLIIEIHAALGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVDNHKDKPSSTDRTNQKTSVLFNEHSLAHDSTKSKPAQLYPPLQVSSPSNFNNSNNNNCTDPFLDRSSSDVVGYFSFQPFNNYATNQDTSTSLCFIPSSSTSSQVMSALNSAVTPTMLQSILPANANPTLSLQSDNNPSAHIHGVQAWEATAFSNNGSKNSGGNSDIPLQKYSNNFMENNTLTWEKNSHVNVVPVQAEQDDIKWSEYLNTPFFLGNQISQSIYSEVKPEMGFITDEATTSWHHNSQQHPQVFQGSDIYNKDMQRFSLAFGQTL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2690 404 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi06g2690 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi06g2690 404 SMART sant 66 114 IPR001005 -
Mibi06g2690 404 SMART sant 13 63 IPR001005 -
Mibi06g2690 404 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi06g2690 404 MobiDBLite consensus disorder prediction 144 158 - -
Mibi06g2690 404 MobiDBLite consensus disorder prediction 168 187 - -
Mibi06g2690 404 FunFam MYB transcription factor 68 140 - -
Mibi06g2690 404 Gene3D - 11 67 - -
Mibi06g2690 404 CDD SANT 17 61 IPR001005 -
Mibi06g2690 404 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi06g2690 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mibi06g2690 404 MobiDBLite consensus disorder prediction 119 143 - -
Mibi06g2690 404 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi06g2690 404 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi06g2690 404 CDD SANT 69 109 IPR001005 -
Mibi06g2690 404 MobiDBLite consensus disorder prediction 119 187 - -
Mibi06g2690 404 FunFam Myb transcription factor 11 67 - -
Mibi06g2690 404 Gene3D - 68 149 - -
Mibi06g2690 404 PANTHER MYB DOMAIN PROTEIN 55 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2690 Mibi-ChrMibi06 46886904 46888315 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2690 1 404 MYB Transcription Factor Family AT1G09540 47.294 2.67e-110 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g2690 Myb_DNA-binding 2.7e-15 CL0123