Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2665 ATGGGCAGGCACTCTTGCTGCTATAAGCAGAAGCTTCGGAAGGGTCTATGGTCCCCTGACGAGGATGAAAAACTTCTGAGACATATCACCAAGTACGGCCACGGTTGTTGGAGCTCTGTTCCTAAGCAAGCCGGCCTTCAGAGGTGTGGTAAGAGCTGTCGGCTGAGGTGGATCAATTACCTGAGGCCTGACTTGAAGAGAGGAACATTCTCACAGGAAGAAGAAAACCTTATCATTGAGCTTCACGCTGTATTGGGAAATAGGTGGTCTCAAATTGCGGCGCAACTGCCTGGAAGAACTGACAATGAAATAAAGAATCTGTGGAATTCCTGCTTAAAGAAGAAACTGAGGCAGAAAGGCATCGACCCTGTTACCCACAAGCCACTCTCTGAGGTTCAAAATGGAGATGACAAAGACAAAGATCACAATGAATTGAAACTTCTCAAATCAGAAAGCCCCAATTCAGATACCACAAAATCATTCACACCCATTATGGAAGGTTGTTCCAGTTTCAAGTACAACAATGGCACAAGTAACACTAATTTACCAATCACCTGTAGCAGCAGAGAATTGCTCCCAGATGGGTTCACAACGAGCTACACAACTTCAGGGATGATGGGGAATTTCCCACTTCAGATGAATTATGCACCCACTGGTGATACCTTCTCTGCTAATTCAAACCCTTCCCAATGGTTCACCCAGACTGGAAGACCAATACTCAATATGAACCCTGAATTTGCTTCCAGTTCCATCATGTCTAATGTTATTGTTCCTCCACACACTTCATATCTTGGTGTTCCCTGCGATAATATTTCTGCAGCCTCTTACACTGAGAATGTATCACAGCCTCATATATGGGGATTGACAGATTCTACAAAAGAAACCCAAATTCAAGTGCTGCAAAACCAAATAGAGGAAGCCAAGTGGGGCGATTACGTGCAAAACCCAATCTTAATGCTGCCCGTGACTGATAATTTAGGGGTCATGTTGCCCCATAACAAGCAGCAAGAAGAACCCTCGCAATCACAGACCTGTAATATGTTTTCTAAGGACATCCAGAACATCACGGCTGCGTTTGGACATATATAG 1089 0.4444 MGRHSCCYKQKLRKGLWSPDEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSEVQNGDDKDKDHNELKLLKSESPNSDTTKSFTPIMEGCSSFKYNNGTSNTNLPITCSSRELLPDGFTTSYTTSGMMGNFPLQMNYAPTGDTFSANSNPSQWFTQTGRPILNMNPEFASSSIMSNVIVPPHTSYLGVPCDNISAASYTENVSQPHIWGLTDSTKETQIQVLQNQIEEAKWGDYVQNPILMLPVTDNLGVMLPHNKQQEEPSQSQTCNMFSKDIQNITAAFGHI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2665 362 SMART sant 66 114 IPR001005 -
Mibi06g2665 362 SMART sant 13 63 IPR001005 -
Mibi06g2665 362 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi06g2665 362 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi06g2665 362 Gene3D - 69 147 - -
Mibi06g2665 362 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi06g2665 362 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi06g2665 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi06g2665 362 CDD SANT 17 61 IPR001005 -
Mibi06g2665 362 Gene3D - 11 67 - -
Mibi06g2665 362 PANTHER MYB DOMAIN PROTEIN 55 1 247 - -
Mibi06g2665 362 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi06g2665 362 CDD SANT 69 109 IPR001005 -
Mibi06g2665 362 FunFam MYB transcription factor 68 140 - -
Mibi06g2665 362 MobiDBLite consensus disorder prediction 122 141 - -
Mibi06g2665 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi06g2665 362 FunFam Myb transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2665 Mibi-ChrMibi06 46718784 46720044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2665 1 237 MYB Transcription Factor Family AT4G01680 61.765 2.16e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g2665 Myb_DNA-binding 5.3e-14 CL0123