Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2662 ATGGGCAAAACTTCTAGTTCATATTCCTTGTCGTCGTCGATTAGCAGTAACAGCAATAATCCCGCCTTCACAACTGCATCTTCACTCGAACACCTTCCTACAGATCTTAGGCTTAGTCTCAGCATTTCACCCTCTCCACACCTTCACTCTTTTATTTCAAGGGGGAAACATTCAGATAAGAGGACGCTGGGAAGAAGTGGTTCACATGCAGCTGAAGTAAATAGTAGTCGCAGCTTCTTTGTAAAGGTGTACATGGAAGGGATTCCAATAGGCAGAAAGCTGAATTTATTAGCTCAACACGGCTACCGTGAGTTAATAAAGACGCTTGAGCACATGTTTGACACTACCATTACATTGGGCTCTGAGATGGAGGAAGTACTTCAACCAGAGAGATGGCATGTGCTGACGTATGAAGATGACGAGGGGGACTTGATCATGGTCGGAGATATCCCTTGGGAGATGTTCTTATCCAGCGTCAGGAGATTGAGGATCACCAGGGTAGGCGCATTCGGGCGTTAA 519 0.4586 MGKTSSSYSLSSSISSNSNNPAFTTASSLEHLPTDLRLSLSISPSPHLHSFISRGKHSDKRTLGRSGSHAAEVNSSRSFFVKVYMEGIPIGRKLNLLAQHGYRELIKTLEHMFDTTITLGSEMEEVLQPERWHVLTYEDDEGDLIMVGDIPWEMFLSSVRRLRITRVGAFGR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2662 172 SUPERFAMILY CAD & PB1 domains 70 165 - -
Mibi06g2662 172 ProSiteProfiles PB1 domain profile. 78 169 IPR000270 GO:0005515
Mibi06g2662 172 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 68 166 IPR003311 GO:0005634|GO:0006355
Mibi06g2662 172 Pfam AUX/IAA family 68 166 IPR033389 -
Mibi06g2662 172 Gene3D - 72 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2662 Mibi-ChrMibi06 46665749 46666590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2662 82 164 B3 DNA Binding Superfamily AT4G23980 40.964 1.19e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi06g2662 AUX_IAA 3.1e-29 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0318 02 3160426 3161271 Mibi06g2662 06 46665749 46666590 CCT
Mibi06g2662 06 46665749 46666590 Mibi06g2662 06 46665749 46666590 ECH