Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2657 ATGGCAGAGAATGGCTTGGATGGTGATGCGACTAAGCATGATGAGGCAACCACGTCAGAGAGTCACGGAAGAACAAGCACAGATGAGGAAAGCAAAGAGACGGCTGAGAAAAAAGGGAAAGCAGATACCGTTCCATTTCACAAGCTATTCTCATTTGCGGATTCCACTGATACTCTGTTAATGATTGCTGGTACCATAGGGGCCATTGGAAATGGTATGGGTTTGCCTCTCATGGCATTGTTGATGGGCCAAATGATCAATGCTTTTGGAAATAACCAGCAAAGTAGTGACATCACTGCACAGGTTTCTAAGGTTTCCTTGAAGTTTGTGTACTTGGCAGTAGGATGCGGAGTAGCAGCATTTCTTCAGGTGTCATGCTGGATGGTCACAGGGGAAAGACAGGCTGCGAGAATAAGGGGATTGTATCTGAAAACCATATTAAGACAAGATGTTACTTTCTTTGACAAGGAAACAAACACCGGAGAGGTGGTCGGGAGAATGTCCGGCGATACTGTTCTCATACAGGATGCCATGGGAGAAAAGGTTGGGAAATTTCTGCAATTAGTTACAACATTCATTGGCGGCTTTGTGGTGGCATTTATTAAAGGATGGCTTCTCTCACTTGTCATGTTGTCCATTCTTCCATTACTTGCGGTAGCCGGAGCTTCCATGGCCCTCATTATAGGAAGGATGGCTTCTCGTGGTCAATCTGCTTATGCAAAAGCTGCAAATATTGTTGAGCAAACTCTTGGCTCTATTAGAACTGTTGCATCCTTCACAGGTGAAAAGCAAGCAGTGTCTCGTTATAGCAGATTTCTTGTGGATGCTTACAAATCGGGAGTTCATGAAGGTTTTGTAGCTGGCCTAGGCTTCGGCATGGTTATGTTTGTCTTTTTCTGTGGTTATGGTTTGGCTGTATGGTTTGGTGCAAAGTTGATATTAGAAAAAGGATATAATGGGGGTACGGTGATTAATGTGATTGTTGCCATATTAACTGCTTCCATGTCTCTTGGGCAGGCCACCCCGTGTTTGAGTGCTTTTGCTGCGGGTCAAGCTGCGGCTTATAAAATGTTTGAGACAATAGAGAGAAAACCAGAAATAGACTCTTATGATTCCAGCGGCAAAATATTAGAGGACATTAATGGCGACATAGAGTTGAAGGATGTTTACTTTAGTTATCCAACCAGACCCCAGGAGCTAATATTCAATGGCTTCTCTCTTCACATACCAAATGGCACCACTGCTGCCTTGGTTGGAGAGAGTGGAAGTGGGAAGTCAACAGTTATTAGCTTAGTAGAAAGGTTTTACGATCCACAGGCAGGTCAAGTTCTTATTGATGGCGTTAACTTGAGAGAACTTCAGCTTAGATGGATTAGAGGCAAAATTAGCCTCGTCAGCCAAGAGCCCGTGTTGTTTGCATCAAGCATCAGGGATAACATCTTATATGGAAAGGAGGGAGCAACCATTGAAGAAATAAGGGCTGCAGCTGAACTTGCAAATGCTGCAAAGTTTATTGACAAATTGCCACAGGGATATGACACAATGGTTGGTGAGCATGGAACTCAATTGTCTGGTGGGCAGAAACAACGTATTGCTATTGCAAGAGCAATTATAAAAGATCCAAGAATACTCCTTCTAGATGAAGCGACGAGTGCTCTAGATGCAGAGTCTGAAAGGATAGTTCAAGAGGCCTTAGATAGGGTCATGGTCAACAGAACTACTGTTATTGTGGCTCATCGATTGAGCACAGTGAGGAATGCTGATATGATTGCTGTGATTCATAGAGGAAAGATGGTTGAAAAAGGAACGCATTCGGAGTTGCTCCAGGATCCCGAAGGAGCTTACTCTCAGCTTGTACGTTTGCAAGAAGTAAACAAAGAGTCAGCGGAACCTTCAGAGCATCAAAATAAAAGTGAAATTTCCGTAGAATTATTTAGACAATCGAGCCAAAGGAGGTCACTTCGGAGATCCATAAGTCGAGGATCATCTGCGGGCAACAGTAGTAGGCATTCATTTTCAGTAGCCTTTGGCATGCCCACTGTATTTAACGTCCCTGAACCTGAGCTTGATAAATTAGACGATAGAAAAGAATTGCCAGAGGTTCCTATTCGTCGCCTTGCTTCCCTTAACAAGCCTGAAATTCCAGTGATTCTGCTTGGATGTGCGGCTGCCATTATAAATGGAGCAATACTACCGGTTTTTGGTTTGTTGATTTCCTCTGTTATCAAAACATTCTATGAGCCACCTCATCAGATGAGAAAGGATTCCAGATTTTGGGCACTTATTTTCTTAGCCCTTGGCCTTGCATCTTTGGTTGCAATTCCATCTCGAGGATACTTTTTTTCTGTTGCTGGTAGTAAGTTAATCCAACGCATAAGACTGATGTGTTTTGAGAAGGTTGTAAACAATGAGGTTGGTTGGTTTGATGACCCAGAGCACTCAAGTGGAGTGATAGGTGCAAGGCTCTCGGCAGATGCTTCTACTGTGCGTGCCCTTGTTGGTGATGCTCTTGGTCTTCTTATTCAAAATATAGCATCAACACTAACTGGTTTAGTTATTGCTTTCGTTGCGAGCTGGGAGTTAGCTTTCATTATTCTGGTTATTATTCCCCTGATTGGGGTTAATGGATATGTTCAAATGAAATTCATGAAAGGGTTTAGTGCTGATGCAAAGATGATGTACGAAGAAGCAAGCCAAGTAGCTAATGATGCTGTTGGAAGCATAAGGACAGTAGCTTCTTTTTGTGCAGAAGAAAAGGTAATGGAACTGTATAGGAAGAAATGCGAAGGCCCTATGCAATCTGGGATACAACTAGGCTTGATAAGTGGAATCGGATTTGGGTGTTCGTTTTTCTTACTTTTTAGCGTCTACGCAACAAGTTTCTATGCTGGAGCCAGACTTGTGGATGCTGGCAGAACTACGTTCTCAGCCGTTTTTCGGGTTTTCTTTGCTTTGACAATGGCGGCAATGGCAGTTTCCCAGTCAAGCTCTATGGCTCCGGATTCTACAAAGGCCAAGGCAGCCACTTCTTCCATATTTGAACTAATTGATAGGAAGTCTAAGATCGACTCGAGCGATGAGTCTGGTGCCACGTTGGACAACGTGAAGGGAGAAATTGAACTTCGTCATGTGAGCTTCAAATATCCATCTAGACCAGACATACAAATTTTTCGAGACCTTAGCTTGGCAATTCATTCGGGCAAGACAGTAGCCCTCGTTGGAGAGAGTGGAAGCGGAAAATCAACGGTGATTGCACTGCTACAAAGATTTTACGACCCAGATGCAGGTGAGATCACACTTGATGGAAGGGAACTCCGAATGTTACAGATAAAGTGGTTAAGACAGCAGATGGGGCTGGTGAGTCAAGAACCGGTGTTATTCAATGACACAATCCGTGCCAATATTGCTTATGGAAAAGGAGGCGATGCAACAGAAGCGGAAATCATAGCCGCAGCAGAACTAGCCAATGCTCATAAATTCATTAGTGGCTTACATCAGGGTTATGACGCAATAGTGGGGGAGAGGGGGATGCAGCTATCTGGGGGGCAGAAACAGAGGGTGGCCATAGCACGTGCGATAATAAAGAGTCCAAAGATATTGTTATTGGATGAAGCGACAAGTGCGTTAGATGCAGAGTCAGAGAGAGTGGTGCAAGAAGCATTAGACAAAGTGATGGTGAATAGAACAACGGTGGTTGTGGCGCATCGTCTATCAACTATTAAGAATGCCGATGTGATAGCGGTGGTCAAGAATGGGGTCATCGTGGAGAAAGGGAAGCATGAGGCGTTGATTAACATTAAAGATGGCTTCTATGCCTCCCTTGTTCAGCTTCATACAAGTGCTTCTACTGTTTGA 3855 0.4389 MAENGLDGDATKHDEATTSESHGRTSTDEESKETAEKKGKADTVPFHKLFSFADSTDTLLMIAGTIGAIGNGMGLPLMALLMGQMINAFGNNQQSSDITAQVSKVSLKFVYLAVGCGVAAFLQVSCWMVTGERQAARIRGLYLKTILRQDVTFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLVTTFIGGFVVAFIKGWLLSLVMLSILPLLAVAGASMALIIGRMASRGQSAYAKAANIVEQTLGSIRTVASFTGEKQAVSRYSRFLVDAYKSGVHEGFVAGLGFGMVMFVFFCGYGLAVWFGAKLILEKGYNGGTVINVIVAILTASMSLGQATPCLSAFAAGQAAAYKMFETIERKPEIDSYDSSGKILEDINGDIELKDVYFSYPTRPQELIFNGFSLHIPNGTTAALVGESGSGKSTVISLVERFYDPQAGQVLIDGVNLRELQLRWIRGKISLVSQEPVLFASSIRDNILYGKEGATIEEIRAAAELANAAKFIDKLPQGYDTMVGEHGTQLSGGQKQRIAIARAIIKDPRILLLDEATSALDAESERIVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLQDPEGAYSQLVRLQEVNKESAEPSEHQNKSEISVELFRQSSQRRSLRRSISRGSSAGNSSRHSFSVAFGMPTVFNVPEPELDKLDDRKELPEVPIRRLASLNKPEIPVILLGCAAAIINGAILPVFGLLISSVIKTFYEPPHQMRKDSRFWALIFLALGLASLVAIPSRGYFFSVAGSKLIQRIRLMCFEKVVNNEVGWFDDPEHSSGVIGARLSADASTVRALVGDALGLLIQNIASTLTGLVIAFVASWELAFIILVIIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMQSGIQLGLISGIGFGCSFFLLFSVYATSFYAGARLVDAGRTTFSAVFRVFFALTMAAMAVSQSSSMAPDSTKAKAATSSIFELIDRKSKIDSSDESGATLDNVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDAGEITLDGRELRMLQIKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISGLHQGYDAIVGERGMQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQEALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHEALINIKDGFYASLVQLHTSASTV 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2657 1284 MobiDBLite consensus disorder prediction 1 40 - -
Mibi06g2657 1284 CDD ABC_6TM_Pgp_ABCB1_D1_like 61 345 - -
Mibi06g2657 1284 SUPERFAMILY ABC transporter transmembrane region 699 1019 IPR036640 GO:0005524|GO:0016020
Mibi06g2657 1284 Pfam ABC transporter transmembrane region 718 990 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2657 1284 Pfam ABC transporter transmembrane region 61 335 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2657 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 622 IPR027417 -
Mibi06g2657 1284 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524|GO:0016887
Mibi06g2657 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 620 IPR003439 GO:0005524
Mibi06g2657 1284 Pfam ABC transporter 403 551 IPR003439 GO:0005524
Mibi06g2657 1284 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1039 1276 IPR003439 GO:0005524
Mibi06g2657 1284 CDD ABC_MTABC3_MDL1_MDL2 384 622 - -
Mibi06g2657 1284 SMART AAA_5 1066 1259 IPR003593 -
Mibi06g2657 1284 SMART AAA_5 411 603 IPR003593 -
Mibi06g2657 1284 FunFam ABC transporter B family member 9 48 380 - -
Mibi06g2657 1284 FunFam ABC transporter B family member 1 697 1005 - -
Mibi06g2657 1284 SUPERFAMILY ABC transporter transmembrane region 47 368 IPR036640 GO:0005524|GO:0016020
Mibi06g2657 1284 ProSitePatterns ABC transporters family signature. 1179 1193 IPR017871 GO:0005524|GO:0016887
Mibi06g2657 1284 Gene3D ABC transporter type 1, transmembrane domain 107 1013 IPR036640 GO:0005524|GO:0016020
Mibi06g2657 1284 Gene3D - 1029 1283 IPR027417 -
Mibi06g2657 1284 CDD ABC_MTABC3_MDL1_MDL2 1039 1277 - -
Mibi06g2657 1284 FunFam ABC transporter B family member 1 1029 1279 - -
Mibi06g2657 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 718 1004 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2657 1284 MobiDBLite consensus disorder prediction 626 640 - -
Mibi06g2657 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1277 IPR027417 -
Mibi06g2657 1284 Gene3D - 382 635 IPR027417 -
Mibi06g2657 1284 MobiDBLite consensus disorder prediction 624 647 - -
Mibi06g2657 1284 FunFam ABC transporter B family member 1 374 623 - -
Mibi06g2657 1284 Pfam ABC transporter 1058 1207 IPR003439 GO:0005524
Mibi06g2657 1284 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 349 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g2657 1284 PANTHER ABC TRANSPORTER B FAMILY 25 625 - -
Mibi06g2657 1284 CDD ABC_6TM_Pgp_ABCB1_D2_like 707 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2657 Mibi-ChrMibi06 46622141 46627493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2657 37 1278 Calmodulin-binding Proteins AT2G36910 44.869 0.0 1072