Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2655 ATGATGAACAGAAAGAGAGTCCTCATCTCCGCCGTGTCTGTCATCCTCATAGTGGGTGTGGCCCTCGCCGTGGTAGGCGTCGTCCATTACAAGAACAGCAAAGACAACAGCACCAACACCAATGCTGAGACAGACAGCACAAGCACACGCTCCAAGGTTGTCGCCGCCCTTTGCGAAAGTGCCGACAACCCGGACCTCTGCCACAACACCCTCGACAACGTTAACAGCACCGACCCCAAGGATTACATCAAGGCCGTTGTTGAATCCGCCATGGAGATCGTCATCTCCTCCTTCAACCTCACCGACAGGGTCCAGGTAGAGCACGGAAACAACACCACCAATGGCATCAAGATGGCCGTACAGGACTGCAAGGACCTTTTGCAGTCTGCCATCGCTGAACTTCAGGCCTCAGGCTTGCTGGTTCAGAACCACAATGCCAGGAGCGTTACCGACCGTGAGGATGACCTCAAGAACTGGCTCAGCGCCGTCATCGCCTACCAACAATCTTGTTTGGATGGTTTTGAGGCTGACAATGAGGGTGAGAAGGCCATTCAGAAGCAGTTGCAAGAAGGTGGGCTTGACCATGTGGAGAAGGCAACCGCCTTGGCCCTTGACATTGTCTCCGGCGTTTCTCAGCTTCTGTCCGTCTTTGACTTGGACTTGGACGTAGTGAAGCCGATCACTCCTCGCAAGCTCCTTGGGAACAGCACCTTCAAGGTGGATAACAATGCTTATCCCACTTGGGTGTCCAACCCTGATCAACGCCTTGTTGAGCAGCCCACCCAAGCCTCCAAGCCCAATGTTGTCGTTGCCCAGGACGGAACCGGAAACTTCAAGACCATCCAGGAGGCCGTTGACTCTTACCCTGAGAATTTGGAGGGTAGATTCGTCATCTACGTGAAGGCCGGTGTGTACAATGAGTACGTCCACGTCTCCAAGAAGCAGCCCAACATCCTCATGTACGGTGATGGCCCCAGCATGACCATCGTCACCGGTAACAGGAGCTTCACCTCCGGCTGGAAGACCATCCAAACCGCCACCTTCACCACCGTTGCGGACGGATTCGTTGCCAAGTCGATGGCATTCGAGAACACCGCAGGAGCAGAGGGACACCAAGCAGTTGCACTAAGGGTGATGGGAGACCGCTCAGCGTTCTTCGACTGTGCCATCCGAGGCTACCAAGACACCTTGTACGCACACGCCAAGCGTCAGTTCTACCGCAACTGTGAGATCTCCGGAACCGTGGACTTCATCTTCGGCTACGGAAGCACATTGATCCAGAACTCCACCATCTTGATCAGGAAGCCCATGGACAACCAACAAAACATCGTAGTCGCCGACGGTACCGCCGACAAGCAAATGCGCACAGGCATTGTCCTCCAAAACTGTCACATCATGCCCGACACCACCCTCCAAGCCGACAGGCTCTCCATCAAGTCCTACCTGGCCAGGCCATGGAAGGCTTACTCAAGGGCCATCTTCATTGAGAATGATATCGGTGATGTCATCCAGCCCGATGGCTATCTCCCATGGATGGGAAGCTTGTACCTTGACACCTGCTTCTTCGCCGAGTACGCTAACTCCGGCGCCGGCGCCAACACCAAGGACAGAGTTAAGTGGGGCCATGGTGTCCTCCCCAAGGAAGATGCTCAACAGTACACTGCTGACGCCTGGCTTCAGGCTGACACCTGGCTTCCCGCCACCGGCATTACCTTCGACACCACCTTCACCAAGGCCAACTAG 1743 0.5519 MMNRKRVLISAVSVILIVGVALAVVGVVHYKNSKDNSTNTNAETDSTSTRSKVVAALCESADNPDLCHNTLDNVNSTDPKDYIKAVVESAMEIVISSFNLTDRVQVEHGNNTTNGIKMAVQDCKDLLQSAIAELQASGLLVQNHNARSVTDREDDLKNWLSAVIAYQQSCLDGFEADNEGEKAIQKQLQEGGLDHVEKATALALDIVSGVSQLLSVFDLDLDVVKPITPRKLLGNSTFKVDNNAYPTWVSNPDQRLVEQPTQASKPNVVVAQDGTGNFKTIQEAVDSYPENLEGRFVIYVKAGVYNEYVHVSKKQPNILMYGDGPSMTIVTGNRSFTSGWKTIQTATFTTVADGFVAKSMAFENTAGAEGHQAVALRVMGDRSAFFDCAIRGYQDTLYAHAKRQFYRNCEISGTVDFIFGYGSTLIQNSTILIRKPMDNQQNIVVADGTADKQMRTGIVLQNCHIMPDTTLQADRLSIKSYLARPWKAYSRAIFIENDIGDVIQPDGYLPWMGSLYLDTCFFAEYANSGAGANTKDRVKWGHGVLPKEDAQQYTADAWLQADTWLPATGITFDTTFTKAN 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2655 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 206 IPR035513 -
Mibi06g2655 580 SMART PMEI_2 49 206 IPR006501 GO:0004857
Mibi06g2655 580 Pfam Pectinesterase 267 561 IPR000070 GO:0030599|GO:0042545
Mibi06g2655 580 FunFam Pectinesterase 261 576 - -
Mibi06g2655 580 Gene3D - 261 576 IPR012334 -
Mibi06g2655 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 210 IPR035513 -
Mibi06g2655 580 Pfam Plant invertase/pectin methylesterase inhibitor 53 205 IPR006501 GO:0004857
Mibi06g2655 580 SUPERFAMILY Pectin lyase-like 261 573 IPR011050 -
Mibi06g2655 580 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Mibi06g2655 580 PANTHER PECTINESTERASE 20 566 - -
Mibi06g2655 580 CDD PMEI-like_3 56 211 - -
Mibi06g2655 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 44 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2655 Mibi-ChrMibi06 46602519 46604399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2655 4 569 Carbohydrate Esterase AT2G26450 37.582 5.79e-128 387