Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2654 ATGAGTGCCAAAGTCCTCATCTCCGCAATCTCCCTCATCCTTGTGGTAGGGGTAGCCATCGGCATCGTCATAGCCGTCCAAAAACACAACGGTAACGGTAATGCCGTCCAAACCACCTCCCACAACGCCGTGGCTCAGGTTTGTGAGAGCACCGACGACCCAAAGTTCTGCATTCAAACTTTGAGCAACGTCCAGGACTCTAACCCCAAGACAATCCTAAGCGCCATTGTGGAAGCAACCACAAACAGCGTCATCAAGGGCCTTAACATGAGCGACAGGCTCATCGTTGACCATGCCAACAGCGAGAAAGGCATTAAGATGGCCCTTGAAGACTGCAAGGACTTGCTCCAATTCGCCATGGACAGTCTTCAACTCTCAACCAACTTGTTGCAAAATGACCTCAAAACCGTGACCGCCCAAACCCCTGACTTCAGGAACTGGCTTGGCGCCGTCATCTCCTACCAACAGGCATGTACGGAGGGATTCGATGACAACAACGACGGTGAGAAACAGGTGAAGTCACAGCTTCAAGAGAAAGCATTGGACGGCATCGGTAAGGTCACCGGAATAGCCCTTGACATTGTCTCCGATCTGTCCAAGATCCTTGGAAAGTTCGGTTTACAGTTGGATTTGAAACCAGCTTCACGCCGCCTTTTGGAGGTGGACAGCGAGGGCTATCCCACATGGTTCGGTGCTTCTGACCGTAATTTGTTGCAGAAGATGAGGAAGGGACATCATGTGAAGCCCAACGTTATTGTGGCTAAGGATGGAAGCGGTAACTTTAAGACCGTCGCTGAGGCTATTGCCTCTTACCCTAAGAATGGTCTCGCCGGCCCTAATGACAGGTATGTCATCTTGATCAAGGCTGGCGTCTACCAAGAGTACATCGTCGTCCCTAAAACCGCCGTCAACATCCTCATGCTCGGTGAGGGCGCCGGCAAAACCATCATCACCGGAAACAAGAACTTCGTCGATGGTGTCAAGACCATGCAAACTGCCACCTTCGCCAACACTGCCAATGGATTCATTGCCAAGCACATGTCATTCGTGAACAGCGCTGGAGCTGAAAAGCACCAGGCCGTGGCTTTGAGGAACCAAGGAGACATGTCAGCTTTCTTCGATTGCGCCATCGTGGGTTACCAAGACACTTTGTACGCTCAGACCAATCGTCAGTTCTACAAGAACTGTGACATCTCTGGTACCATTGACTTCATCTTTGGTGTGTCACCCACATTGATCCAGAGCTCCAGAATCGTCTTGAGGAAGCCAATGGAGAACCAGTTCAACACCGTGACCGCCGACGGTACACCCCAGAAGAACATGCCCACCGGAATTGTGATCCAGAACTGTGACATCGTGCCTGAACCAGCCTTGTACCCAAGGAGGTTCGAATTGAAGTCATACTTGGGAAGGCCATGGAAGGCATACTCAAAGACAGTGGTTATGGAATCTAGAATCGGGGATGTGATCCACCCAGATGGATGGATTCCTTGGATGGGTAACATGTATTTGGATACATTGTACTATGCTGAGTACAACAACGAAGGACCTGGTGCTAGTGTTAATGGAAGGGTTAAGTGGTCTGGTTACAAGGGTCTGATTGGCAAGAGCGAAGCCCAACAGTTCACCGCTGCCCAATTCCTGAGGGGTGGGCCCACCTCCAACTCTGCCGTTTGGCTCAAGGCTCTCCACGTTCCTTATGACCTTACCTTCACCAAGGCTTAA 1725 0.5096 MSAKVLISAISLILVVGVAIGIVIAVQKHNGNGNAVQTTSHNAVAQVCESTDDPKFCIQTLSNVQDSNPKTILSAIVEATTNSVIKGLNMSDRLIVDHANSEKGIKMALEDCKDLLQFAMDSLQLSTNLLQNDLKTVTAQTPDFRNWLGAVISYQQACTEGFDDNNDGEKQVKSQLQEKALDGIGKVTGIALDIVSDLSKILGKFGLQLDLKPASRRLLEVDSEGYPTWFGASDRNLLQKMRKGHHVKPNVIVAKDGSGNFKTVAEAIASYPKNGLAGPNDRYVILIKAGVYQEYIVVPKTAVNILMLGEGAGKTIITGNKNFVDGVKTMQTATFANTANGFIAKHMSFVNSAGAEKHQAVALRNQGDMSAFFDCAIVGYQDTLYAQTNRQFYKNCDISGTIDFIFGVSPTLIQSSRIVLRKPMENQFNTVTADGTPQKNMPTGIVIQNCDIVPEPALYPRRFELKSYLGRPWKAYSKTVVMESRIGDVIHPDGWIPWMGNMYLDTLYYAEYNNEGPGASVNGRVKWSGYKGLIGKSEAQQFTAAQFLRGGPTSNSAVWLKALHVPYDLTFTKA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2654 574 Pfam Plant invertase/pectin methylesterase inhibitor 43 194 IPR006501 GO:0004857
Mibi06g2654 574 SUPERFAMILY Pectin lyase-like 247 555 IPR011050 -
Mibi06g2654 574 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Mibi06g2654 574 SMART PMEI_2 39 194 IPR006501 GO:0004857
Mibi06g2654 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 194 IPR006501 GO:0004857
Mibi06g2654 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 199 IPR035513 -
Mibi06g2654 574 FunFam Pectinesterase 244 571 - -
Mibi06g2654 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 198 IPR035513 -
Mibi06g2654 574 Gene3D - 244 570 IPR012334 -
Mibi06g2654 574 Pfam Pectinesterase 250 550 IPR000070 GO:0030599|GO:0042545
Mibi06g2654 574 CDD PMEI-like_3 47 200 - -
Mibi06g2654 574 PANTHER PECTINESTERASE 15 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2654 Mibi-ChrMibi06 46593158 46595300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2654 5 567 Carbohydrate Esterase AT3G05610 38.704 2.12e-129 392