Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2653 ATGAAAACGAAGAAAATAATCATATCCGCAGTTTCCCTCATCCTTGTGTTGGGGGTTGTGATCGGCACCGTCGTGGTGGTTCACAACAAGAACAAAGACCCTCAGGTCACCCAACGTCAGAATGCAGTGAGAACAATATGCCTCAACACAGAGGACCAAAAACTATGCCACGACACTTTGGGCAACGTTCAAAACAGCTCAGACCCAAAAGCATTCTTGGCCGCTGCCATACAAGCCTCCCTCAACAGCCTCATCAAGGCCTTGAACATGACCGATAAAATCAGCATCGAACAAGGAAACAACACACAAGGCATTGTGAAGATGGCCACCAATGACTGCAAGGACTTCCTCCAATCCGCCATGGATAGCCTCCAGTCTTCCTCTGACTTTTTGGGCAACACCACCCTCCAAACATTGACCGATCAATCACCTGACTTCAAGAATTGGCTGGCTTCCGTAATCTCTTACCAACAGGCCTGCATGGACGGATTCGACGACAACCTCGACGCCGCCAAAAAGGTGAAGACTCAGATTGAAGAGAATGGCCTGGATGATATGGGGAAGCTCACAGGAATAGCACTTGATATTATGGCTGATTTTGAGAACATATTGAATCATTTTGGTCTGAAGGTGCAAGTGAACACTTCTTCTCGTCGTCTTATTGAGGTGGACAGTGAAGGATATCCCACTTGGTTTAAGGCCTCTGATAGGAAGTTGTTGGCAAACATGAGGAGGGGAAGGGGACATCACATAAAGCCTAACGTTGTGGTTGCCCAGGATGGAAGTGGACAGTTCAAGACCATACAGGCCGCCGTTAACTCTTATCCTAAGGGTTGGAAGGGAAGGTATATCATCTTCGTTAAGGCTGGTACATACCGTGAGTATGTCGTCATCCCTAAGACCGCCGTCAATGTCCTCATGTACGGTTCGGGCTCCGGTAAAACCATCGTCACCGGTAACAGAAACAACGTTGATGGTTACACCACATCCAACTCAGCTACTTTCGTGAATCAAGGAAACGGGTTCATTGCCAAATACATGACATTTGTGAACTCGGCGGGTCCTGAGAAGCACCAGGCAGTGGCATTCAGGAACCAAGGAGATATGTCAGGTATCTTCGATTGTTCTTTTGTGGGATACCAGGACACCTTGTACGCTCAGACCAACCGTCAATTCTACCGTAACTGCGACATCTCCGGCACCGTTGACTTCATATTCGGGGTGTCAACCACGCTAATCCAGAGCTCAAGAATCATAGTGAGGAAGCCAATGGACAACCAATTCAACACAGTGACGGCAGATGGGAGAGTACAAAAGAACATGCCCACCGGAACAGTGATCCAGAACTGTGACATTGTGCCGGAGAGGGCTCTGTTCCCAGTGAGGTTTAAGATAAGATCGTACCTAGGAAGGCCATGGAAGCAGTACGCGAGAACAGTGGTGATGGAATCAAGAATAGCCGATTTTATTCAGCCAGAAGGGTGGACCCCATGGGCAGGAAACATGTACCTCAATACTTTGTACTATGCAGAGTACAACAATGAAGGACCTGGAGCTAATGTGGCGAAGAGGGTAAGGTGGCCTGGTTACAAGGGACTTATCAGTAAGAATGAGGCTGTTCAGTTCACCGCCGGAACCTTCCTCAAAGGTGGCATCACTTCACGAGTCGAGGACTGGATGAAGCCTCTTCATGTTCCTTTTGACATTGGCTTCACTAAGGCTTGA 1725 0.4823 MKTKKIIISAVSLILVLGVVIGTVVVVHNKNKDPQVTQRQNAVRTICLNTEDQKLCHDTLGNVQNSSDPKAFLAAAIQASLNSLIKALNMTDKISIEQGNNTQGIVKMATNDCKDFLQSAMDSLQSSSDFLGNTTLQTLTDQSPDFKNWLASVISYQQACMDGFDDNLDAAKKVKTQIEENGLDDMGKLTGIALDIMADFENILNHFGLKVQVNTSSRRLIEVDSEGYPTWFKASDRKLLANMRRGRGHHIKPNVVVAQDGSGQFKTIQAAVNSYPKGWKGRYIIFVKAGTYREYVVIPKTAVNVLMYGSGSGKTIVTGNRNNVDGYTTSNSATFVNQGNGFIAKYMTFVNSAGPEKHQAVAFRNQGDMSGIFDCSFVGYQDTLYAQTNRQFYRNCDISGTVDFIFGVSTTLIQSSRIIVRKPMDNQFNTVTADGRVQKNMPTGTVIQNCDIVPERALFPVRFKIRSYLGRPWKQYARTVVMESRIADFIQPEGWTPWAGNMYLNTLYYAEYNNEGPGANVAKRVRWPGYKGLISKNEAVQFTAGTFLKGGITSRVEDWMKPLHVPFDIGFTKA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2653 574 SUPERFAMILY Pectin lyase-like 250 567 IPR011050 -
Mibi06g2653 574 FunFam Pectinesterase 248 571 - -
Mibi06g2653 574 Pfam Plant invertase/pectin methylesterase inhibitor 42 196 IPR006501 GO:0004857
Mibi06g2653 574 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Mibi06g2653 574 Pfam Pectinesterase 254 550 IPR000070 GO:0030599|GO:0042545
Mibi06g2653 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 19 169 IPR006501 GO:0004857
Mibi06g2653 574 PANTHER PECTINESTERASE 16 561 - -
Mibi06g2653 574 SMART PMEI_2 38 196 IPR006501 GO:0004857
Mibi06g2653 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Mibi06g2653 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 197 IPR035513 -
Mibi06g2653 574 Gene3D - 248 571 IPR012334 -
Mibi06g2653 574 CDD PMEI-like_3 45 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2653 Mibi-ChrMibi06 46588550 46591238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2653 5 571 Carbohydrate Esterase AT2G47030 40.033 8.06e-133 398