Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2637 ATGCGTGTGAACGAAGTCAGAAGGTCAACCAAGCCAAGCCTAAGTGCCATGCATCAAGTGTTTGATTACTGCAATAATAATATGGATATGATGAAGTACAGGGGAGGTGAGATGGCGAGAAGCGTATCGGATTGCGGGTTATCAGGAAGTGAAGAAGAGATGATGACGATGATGGGGATAAAGAAAGGGCCGTGGACGGAGGAAGAGGACGCTGTTCTGGCTAGCTACATATCCCTCCATGGCGAAGGACACTGGAACTCTCTCGCTCGCTCCGCAGGCCTGAAGAGAACGGGGAAAAGCTGTAGATTAAGATGGCTCAACTATCTGCGTCCTGATGTACGTCGTGGCAATATTACCCTCCAGGAACAGCTCTTGATTCTCAATCTCCATTCCCGCTGGGGCAATAGGTGGTCGAAGATAGCGCAGGAGTTGCCGGGGAGAACAGACAATGAGATAAAGAACTACTGGAGGACACGTGTGGTGAAGCAGGCCAAGCAGATGAAATGTGATGTGAATAGCAAACAGTTTAGAGATGCCCTGCGTTTCCTATGGATTCCTCGCTTGGTGGAGAGAATCCAAGCCTCCTCCTCTTCTTCTTCTTCTTCTTACTATACAGAAGCAACTTCTCTCTCTGATCATTCCATGGCAGCCAGTGGTGAGGACGATACATCCTCTTGTTCTCCTTCTGCACAAAAAGAAGCCTCCACCTCTGGGATCCATCACTCGGAATATTCCCCTGAATTCCAACCGTTTGAAGAACCCAGTGGCGCTGATTTCTGGACCTACGAAAACATATGCTTCTTGCAACAACAGCTTGCCGATGACCCCTGA 831 0.4898 MRVNEVRRSTKPSLSAMHQVFDYCNNNMDMMKYRGGEMARSVSDCGLSGSEEEMMTMMGIKKGPWTEEEDAVLASYISLHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLQEQLLILNLHSRWGNRWSKIAQELPGRTDNEIKNYWRTRVVKQAKQMKCDVNSKQFRDALRFLWIPRLVERIQASSSSSSSSYYTEATSLSDHSMAASGEDDTSSCSPSAQKEASTSGIHHSEYSPEFQPFEEPSGADFWTYENICFLQQQLADDP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2637 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 113 IPR017930 -
Mibi06g2637 276 ProSiteProfiles Myb-like domain profile. 110 160 IPR001005 -
Mibi06g2637 276 ProSiteProfiles Myb-like domain profile. 57 109 IPR001005 -
Mibi06g2637 276 SUPERFAMILY Homeodomain-like 58 156 IPR009057 -
Mibi06g2637 276 MobiDBLite consensus disorder prediction 213 252 - -
Mibi06g2637 276 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 59 234 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi06g2637 276 FunFam Myb transcription factor 62 114 - -
Mibi06g2637 276 Gene3D - 61 114 - -
Mibi06g2637 276 SMART sant 61 111 IPR001005 -
Mibi06g2637 276 SMART sant 114 162 IPR001005 -
Mibi06g2637 276 Gene3D - 119 160 - -
Mibi06g2637 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 164 IPR017930 -
Mibi06g2637 276 Pfam Myb-like DNA-binding domain 115 158 IPR001005 -
Mibi06g2637 276 Pfam Myb-like DNA-binding domain 62 109 IPR001005 -
Mibi06g2637 276 MobiDBLite consensus disorder prediction 213 243 - -
Mibi06g2637 276 FunFam MYB transcription factor 119 182 - -
Mibi06g2637 276 CDD SANT 119 158 IPR001005 -
Mibi06g2637 276 CDD SANT 64 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2637 Mibi-ChrMibi06 46443716 46445032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2637 60 202 MYB Transcription Factor Family AT1G48000 76.224 5.18e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g2637 Myb_DNA-binding 8.2e-15 CL0123