Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2636 ATGGTTGCTACCAAAACTCGGATCCTATATATTCTGCTGCTTCTTTCGTTTTCATGCGGCTCTTGCAAGCCTTCCACCTGGAACTCAGACAAACATACAAATTATAAGAATTGGATTTCTTGGAACCTCCACAATTACCGGAAGGCGACGCTTTTGAAGACCCAATGGAATGATCTGAAGCTGGGGTTGGCTGAGAGTAACAGAGTCAAAATCACTGTTCGCCAAGACGCTACTGGTGACTTCAGCACCATCACACAAGCGCTGGACAGCATTCCAACACGCAACACCAAAAGAGTTATAGTTTCCGTCGGACCTGGCGTTTATAGGGAGAAGATCGTGATACCCAGAAATAAGCAGTTCATAACATTGTCGGGGGACGCCACAAATCCGCCAACCATTACGGGGAACGATATGGCATCCACCATTGGAAAGGATGGGTTGCCATTGGGCACATTCCACAGTGCCACCGTTGCTGTGGATGCTGATTATTTCGTTGCCGTCAACATCAAACTTGAGAACAGTGCATGGCATGAGGTGGGGAAGGCGGGAGGACAAGCGGTGGCGCTTCGCATCTCAGGGACCAAAGCGGCATTTTACAACTGTAGCTTCTATGGGGATCAAGACACTCTCTACGACCACAAGGGGCTTCACTACTTCTATAATTGCTTCATTCAGGGCTCCGTCGATTTCATCTTCGGCTCTGGCAGATCCCTTTACGAGAAGTGCAGTCTGAATTCAATAGCGAAGAAGGCGGTGTGCATCACGGCTCAGAAGCGCACAATAGCGTCATTAGAGAGCGGGTTCTCGTTCAAGAATTGCACCATAACGGGGAGTGGGCAAGTATATCTCGGGAGAGCGTGGGGTGATTATTCCAGGGTTGTTTTCTCTTACACCTACATGGACAGGGTGGTTGTGCCCCAAGGCTGGAGTGACTGGGGTGACCAAAAGCGCGACTTGAGGGTGTATTACGGGGAGTACAAGTGCAGTGGGCCTGGGGCTAACTCCACAGGAAGAGTGGCGTGGGCACATTCACTCACCGACCAAGAGGCCCTGCCTTTTCTTTCAACCCATTACATTGAAGGTGACACTTGGCTCATTCCCCTCCCCACTTGA 1113 0.5031 MVATKTRILYILLLLSFSCGSCKPSTWNSDKHTNYKNWISWNLHNYRKATLLKTQWNDLKLGLAESNRVKITVRQDATGDFSTITQALDSIPTRNTKRVIVSVGPGVYREKIVIPRNKQFITLSGDATNPPTITGNDMASTIGKDGLPLGTFHSATVAVDADYFVAVNIKLENSAWHEVGKAGGQAVALRISGTKAAFYNCSFYGDQDTLYDHKGLHYFYNCFIQGSVDFIFGSGRSLYEKCSLNSIAKKAVCITAQKRTIASLESGFSFKNCTITGSGQVYLGRAWGDYSRVVFSYTYMDRVVVPQGWSDWGDQKRDLRVYYGEYKCSGPGANSTGRVAWAHSLTDQEALPFLSTHYIEGDTWLIPLPT 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2636 370 FunFam Pectinesterase 66 367 - -
Mibi06g2636 370 Gene3D - 63 368 IPR012334 -
Mibi06g2636 370 ProSitePatterns Pectinesterase signature 2. 224 233 IPR033131 -
Mibi06g2636 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 64 365 - -
Mibi06g2636 370 SUPERFAMILY Pectin lyase-like 70 365 IPR011050 -
Mibi06g2636 370 Pfam Pectinesterase 71 362 IPR000070 GO:0030599|GO:0042545
Mibi06g2636 370 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2636 Mibi-ChrMibi06 46433588 46435822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2636 11 367 Carbohydrate Esterase AT5G47500 39.130 1.16e-89 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2636 06 46433588 46435822 Mibi06g2636 06 46433588 46435822 ECH