LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g2623	ATGTCGGTCCTCCCTGTTTTTATCTCAATCGGTGCCTTAAAAGTCATTCAACCTCTGTTGCTGAAATGGTTACTTGTATCATCTTGCTCACTATTGATAGCTGACTCTAATGCATTATCTCCGGCTAGACCACCTTCTGCTACTATGGTTGTTCGCGATCTGCCACTACCAGCGAATCTCCATGGGCTGAAGCATCTACCATCCCATGGTGGACCAATTCCAACAACATCGCCGACCCATCCTCCTTTATATAGTCCATCCTTCAGTACAGGTCCACCCCCGGCAAGTACACATTCATCCAATCCATTCATGAAGGGCGGTGAAATAGGATCTCATGTTTCTGGTTTTGGAGATATTGCACCTATGCATTCAACAGCTGGTGCGATTCCTTCTGGTCTTGCCCAACCTCCCTTATCCCCTTATGTGTCCAATTGTTGTAAACAAAACACGGTGTTGAAGCGTGGGAGTACGAGTTGTCACTGCGTGTATCCCATAAAAGTAGACCTCCTCCTCTTGAATGTCTCTCAAAACTCTAATTGGAATCTTTTTCTTGATGAATTAGCTACCCAACTTGGGTTGCAAATTTCCCAGATTGAATTGGTAAATTTTTATGTACTCACCTTATCAGCATTAAATATATCAATGGATATCACTCCACATAAAGGGATCGGCTTCTCTGCCAATGAAGCATCCAAAATAAACTCGTCCCTTTCAGTGCATAAGATTCAACTAGATCCTAGATTGGTGGGTGACTACAAACTTCTCAATTTGACGTGGTATGAAGCTCCGCCTCCATCTCAAGCTCCCATGTCTGTTGCATCACCTATGAAAGCTCCTATTTACCACAAACCAGCAACTTCAACACCAAGCACTTCAAATAGGAGAGGACATTCAAGTTTGTATGCTATTCTTGGAATTGGTGCTGGCATACTCTTCATTGCCATTATATCTGTACTCATACTCTGTTTATGCACATTGAGGCCGAAGGCCAAAGGACCGTTGATAGACACTGAGAAGCCAAGGACAGAAGATGCAGTTCCAGCTGCAGGGTCTTTTCCTCATCCAACCAGCACAAGATTTATTGCCTATGAAGAACTTAAAGAAGCAACAAACAACTTTGAAGCAACCAGCTTACTTGGAGAAGGCGGGTTTGGTAGAGTTTTCAAGGGCGTCTTAAATGATGGTACTGCTGTAGCAATTAAGAGGCTTACTAATGGAGGGCAACAAGGGGATAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAATCTTGTAAAACTGGTGGGATACTATAGTAACCGTGACTCATCACAAAATCTTTTATGCTATGAACTTGTTCCAAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTAGGAATCAATTGTCCTTTAGACTGGGATACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACTTGCATGAAGACTCACAGCCCTGTGTTATACACCGAGATTTCAAGGCGTCCAACATATTGCTGGAAAACAACTTCCACGCTAAAGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGCAGAGCTAATTATCTGTCTACTCGTGTCATGGGCACATTTGGGTATGTGGCTCCTGAGTATGCCATGACAGGTCACCTACTTGTTAAAAGTGATGTGTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTTGATATGTCACAACCAGCTGGACAGGAGAACCTGGTTACTTGGGCAAGACCAATCCTAAGAGATAAAGACCGGTTGGAAGAGCTTGCTGATCCAAGGCTGGGGGGGAAATATCCAAAGGAGGATTTTGTCCGGGTTTGTACTATTGCGGCAGCCTGCGTTGCTCCTGAAGCAAGCCAACGACCCACAATGGGGGAGGTGGTGCAGTCACTTAAAATGGTGCAGCGCATGACCGAACATCAGGATTCCATAGTGGCCCCGTCCAATACAAGGACTAACCTTAGACAGTCATCTACCACTTTCGAGTCCGATGGGACATCTTCTATGTTCTCTTCGGGTCCCTACTCTGGTCTAAGTGTCTTTGACAATGACAACGTTTCTAGGACGGCAGTTTTCTCTGAAGACCTTCATGAAGGAAGATGA	2154	0.448	MSVLPVFISIGALKVIQPLLLKWLLVSSCSLLIADSNALSPARPPSATMVVRDLPLPANLHGLKHLPSHGGPIPTTSPTHPPLYSPSFSTGPPPASTHSSNPFMKGGEIGSHVSGFGDIAPMHSTAGAIPSGLAQPPLSPYVSNCCKQNTVLKRGSTSCHCVYPIKVDLLLLNVSQNSNWNLFLDELATQLGLQISQIELVNFYVLTLSALNISMDITPHKGIGFSANEASKINSSLSVHKIQLDPRLVGDYKLLNLTWYEAPPPSQAPMSVASPMKAPIYHKPATSTPSTSNRRGHSSLYAILGIGAGILFIAIISVLILCLCTLRPKAKGPLIDTEKPRTEDAVPAAGSFPHPTSTRFIAYEELKEATNNFEATSLLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMTEHQDSIVAPSNTRTNLRQSSTTFESDGTSSMFSSGPYSGLSVFDNDNVSRTAVFSEDLHEGR	717

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g2623	717	MobiDBLite	consensus disorder prediction	65	104	-	-
	Mibi06g2623	717	MobiDBLite	consensus disorder prediction	661	685	-	-
	Mibi06g2623	717	FunFam	Receptor-like serine/threonine-protein kinase ALE2	451	666	-	-
	Mibi06g2623	717	Gene3D	Phosphorylase Kinase; domain 1	355	450	-	-
	Mibi06g2623	717	CDD	STKc_IRAK	379	649	-	-
	Mibi06g2623	717	ProSitePatterns	Protein kinases ATP-binding region signature.	379	401	IPR017441	GO:0005524
	Mibi06g2623	717	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	497	509	IPR008271	GO:0004672\|GO:0006468
	Mibi06g2623	717	MobiDBLite	consensus disorder prediction	74	89	-	-
	Mibi06g2623	717	SUPERFAMILY	Protein kinase-like (PK-like)	350	650	IPR011009	-
	Mibi06g2623	717	Gene3D	Transferase(Phosphotransferase) domain 1	451	672	-	-
	Mibi06g2623	717	Pfam	Protein tyrosine and serine/threonine kinase	376	648	IPR001245	GO:0004672\|GO:0006468
	Mibi06g2623	717	FunFam	Receptor-like serine/threonine-protein kinase ALE2	353	450	-	-
	Mibi06g2623	717	PANTHER	OS01G0750732 PROTEIN	143	675	-	-
	Mibi06g2623	717	ProSiteProfiles	Protein kinase domain profile.	373	651	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi06g2623	717	MobiDBLite	consensus disorder prediction	90	104	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g2623	Mibi-ChrMibi06	46275971	46281549	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g2623	10	717	Receptor kinase-like Gene Family	AT4G02010	68.347	0.0	980

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Mibi06g2623		PK_Tyr_Ser-Thr	1.8e-44	CL0016