Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2620 ATGGTAGCATCTTGGAGTAGTTATAGCAAGACACAGTGGGCAAATGATATCCATGAATCCACCTCCATATCTTTCAAGCTTTCAGCGGAAACAAAAAGCAAAAGAAAGGCTTTGTACGCTACTATGGATGGTATTACCTCACCTAAAGTTGAGTCAGAAGCATCCACAGCGCCAACTCCAGAAATTCAAGAATCCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGAGGGTGAAATTTGGAGAAAATGTTAGTAAAGTGAAGAATGAAGGGCAGCCACCGGATTCATGGTCTTGGAGGAAATATGGACAGAAGCCTATTAAAGGATCTCCTTATCCAAGAGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAGAGATGCAAAACAGATTCTTCAATGCTCATTGTCACCTACACTTCTTCCCATAACCATCCAGCTCCAGAATTACCCTTCAAAGAATCAAAAACTCAATCTACTGAAGATCTCTCACCTCATACTTCAAAGGCCAAAGACCAAGAAGAGCCAGAGGGAGAGAAGAAAAATCTTCAACTTGCAACAGCTAGCGATCAAGTTGAAAATGAAGAAAATTTTCATTACATGCAATCGCCCATAGGCTGTTCTGAAGACATCATTATTGACCAAGAGGATCTTTTCAAATTGAACCATGAGAAAACGCAAGTCTTAAGAGAGGAAGTGCCCCTCTGTTATTCTCAGCTCAAGAACCTCTCAGCGCTTGAGTCGGAGGAACTTGACTTCTTCGACGAGCTTGAAGAGCTACCCATGTCTCCGTCTTTGTTGAACTTGATGAGCAACAATTTTTCCGACGAAAGGATTCAGGTTGCCCCGTCATGA 873 0.4192 MVASWSSYSKTQWANDIHESTSISFKLSAETKSKRKALYATMDGITSPKVESEASTAPTPEIQESKKRKMVQKTVVRVKFGENVSKVKNEGQPPDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCKTDSSMLIVTYTSSHNHPAPELPFKESKTQSTEDLSPHTSKAKDQEEPEGEKKNLQLATASDQVENEENFHYMQSPIGCSEDIIIDQEDLFKLNHEKTQVLREEVPLCYSQLKNLSALESEELDFFDELEELPMSPSLLNLMSNNFSDERIQVAPS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2620 290 Gene3D WRKY domain 78 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g2620 290 SUPERFAMILY WRKY DNA-binding domain 91 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g2620 290 FunFam WRKY transcription factor 65 67 154 - -
Mibi06g2620 290 ProSiteProfiles WRKY domain profile. 95 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g2620 290 SMART WRKY_cls 93 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g2620 290 MobiDBLite consensus disorder prediction 161 187 - -
Mibi06g2620 290 MobiDBLite consensus disorder prediction 42 70 - -
Mibi06g2620 290 Pfam WRKY DNA -binding domain 95 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g2620 290 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 39 272 IPR044810 GO:0003700
Mibi06g2620 290 MobiDBLite consensus disorder prediction 148 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2620 Mibi-ChrMibi06 46261553 46262983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2620 66 154 WRKY Transcription Factor Family AT1G29280 60.440 9.66e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi06g2620 WRKY 2.1e-24 CL0274