Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi06g2610 | ATGGGAGAGGTTATTATGTTTATCGATGATTTGAAATCATTCTCTGGGATTTCTCGATGCAGAATATGTCATGAAGAAGAATTTGAGAGCTCAAAAAGCTTTGAAGCTCCATGTGCTTGTTCTGGGACCGTTAAGTTTGCACACAGAGATTGCATACAAAGATGGTGCAATGAGAAAGGAAATACAATCTGTGAAATATGTCTCCAGAAATATGAACCTGGTTACACGGCTCCTCCTCCAAAGAAATTGCAGATGAACGATGAAGCAATGACCATTCGAGATAGCCTGCAAATCTCAAGAATGGAGGAAGAATCGCTGAATGCAAGATTAGAGGCAATAGTTGAAAGAGTGACAATAGAAAATGATTACTCTGAATGCACGTCTGCTGCAGATAGAAGTGCATCTTACTGTCGATTCCTGGCCTTGGCATTTACCCTGTTTATGCTTGTGAGACATCTTATCGCTGTGCTCACAAGTGGGAAGGAAGATTACCCATTTACACTTCTAACTGTTTTAATGCTAAGGGCCAGCGGGATTGTGCTGCCCATGTTCATAATTATTAGAATGATTGGAGCGATTCAAAACATAATTCAGCGCCGTTATCAGGATACTGAAGATAGCGCAGAAGCATCTGATGGATACGACAACGAACACGGGACACTGCGTGATGTGATTTTTAGACACGCTTAG | 690 | 0.4145 | MGEVIMFIDDLKSFSGISRCRICHEEEFESSKSFEAPCACSGTVKFAHRDCIQRWCNEKGNTICEICLQKYEPGYTAPPPKKLQMNDEAMTIRDSLQISRMEEESLNARLEAIVERVTIENDYSECTSAADRSASYCRFLALAFTLFMLVRHLIAVLTSGKEDYPFTLLTVLMLRASGIVLPMFIIIRMIGAIQNIIQRRYQDTEDSAEASDGYDNEHGTLRDVIFRHA | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi06g2610 | 229 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 12 | 74 | IPR011016 | GO:0008270 | |
Mibi06g2610 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 77 | IPR013083 | - | |
Mibi06g2610 | 229 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 17 | 200 | IPR033275 | - | |
Mibi06g2610 | 229 | FunFam | E3 ubiquitin-protein ligase MARCH4 | 9 | 77 | - | - | |
Mibi06g2610 | 229 | CDD | RING_CH-C4HC3_MARCH | 20 | 67 | - | - | |
Mibi06g2610 | 229 | Pfam | Protein of unknown function (DUF3675) | 73 | 190 | IPR022143 | - | |
Mibi06g2610 | 229 | SMART | ringv_2 | 19 | 68 | IPR011016 | GO:0008270 | |
Mibi06g2610 | 229 | SUPERFAMILY | RING/U-box | 18 | 72 | - | - | |
Mibi06g2610 | 229 | Pfam | RING-variant domain | 20 | 67 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi06g2610 | Mibi-ChrMibi06 | 46180540 | 46183050 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi06g2610 | 20 | 67 | C3H Transcription Factor Family | AT5G05830 | 40.385 | 1.53e-06 | 45.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi02g0381 | 02 | 3866917 | 3870784 | Mibi06g2610 | 06 | 46180540 | 46183050 | CCT | |
Mibi06g2610 | 06 | 46180540 | 46183050 | Mibi06g2610 | 06 | 46180540 | 46183050 | ECH |