Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2585 ATGTGTGGGGGCGCCATCATCGCCGACTTGATTCCTCGCCACCGTGGTCGCCGCCTTACCCCCTCCCACATCTGGCCTCACACTCCCAGAAACAACGATGATTTCCACCCTCTTCACATCCAAAAGCCTCAACTTTCCACAGGTCATTATGCTCTCTTATCTCACACTAATACTAGTTCGTTCATTCATTCTACCTTCCTTTTTTTAATTTCTAATTCTACGTCTTCTGACTTCATATTTGAGATATTTCCTGCTACAGAAGCCGAGCAGACGGAGAAGCCCGCAAAGAGGCAGAGGAAGAACATTTACAGAGGAATCCGACAGCGTCCATGGGGCAAATGGGCCGCCGAGATTCGCGATCCGAGGAAAGGGGTTCGTGTTTGGCTCGGCACTTACAACACTGCCGAGGAAGCTGCAAGGGCCTATGACAAAGAAGCTCGTAAAATCCGAGGAAAGAAAGCCAAGGTCAATTTTCCCGAGGAAGACGAAGATGTCTCCGTTCAAGCCCGTGGGGACCCACCAACAAGTCTGAATCTGGAGTTGGGTTATGATCCGAGAAAGGGGAGCGAGGAAGGGAAGCTGCCGGAGGAGATGATGGCGTACGACAACTACATGAAGTTTTATGAGATCCCATACTGTGATGCCCAATCGGCGACACCAAGAAATGGCGTTGAGGAGAATGTGGTGGGTGACATGTGGGGCTTCCATGATGAAGGCATTGCAGCATGCGTTACGTCGTCCTCCATGTGA 750 0.508 MCGGAIIADLIPRHRGRRLTPSHIWPHTPRNNDDFHPLHIQKPQLSTGHYALLSHTNTSSFIHSTFLFLISNSTSSDFIFEIFPATEAEQTEKPAKRQRKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTYNTAEEAARAYDKEARKIRGKKAKVNFPEEDEDVSVQARGDPPTSLNLELGYDPRKGSEEGKLPEEMMAYDNYMKFYEIPYCDAQSATPRNGVEENVVGDMWGFHDEGIAACVTSSSM 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2585 249 FunFam Ethylene-responsive transcription factor 2 101 160 - -
Mibi06g2585 249 Gene3D AP2/ERF domain 102 160 IPR036955 GO:0003700|GO:0006355
Mibi06g2585 249 ProSiteProfiles AP2/ERF domain profile. 102 159 IPR001471 GO:0003700|GO:0006355
Mibi06g2585 249 CDD AP2 102 160 IPR001471 GO:0003700|GO:0006355
Mibi06g2585 249 PRINTS Ethylene responsive element binding protein signature 125 141 IPR001471 GO:0003700|GO:0006355
Mibi06g2585 249 PRINTS Ethylene responsive element binding protein signature 103 114 IPR001471 GO:0003700|GO:0006355
Mibi06g2585 249 MobiDBLite consensus disorder prediction 161 192 - -
Mibi06g2585 249 SMART rav1_2 102 165 IPR001471 GO:0003700|GO:0006355
Mibi06g2585 249 SUPERFAMILY DNA-binding domain 102 160 IPR016177 GO:0003677
Mibi06g2585 249 Pfam AP2 domain 103 151 IPR001471 GO:0003700|GO:0006355
Mibi06g2585 249 PANTHER DNA-BINDING DOMAIN 76 174 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2585 Mibi-ChrMibi06 45993419 45994168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2585 92 237 AP2-EREBP Transcription Factor Family AT2G47520 54.110 1.96e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g2585 AP2 1.4e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2585 06 45993419 45994168 Mibi06g2585 06 45993419 45994168 ECH