Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2576 ATGCTTCGCTACGAGATTATTCCCACGTACAGTTCTGTGGACAAGATATATCCCAGACTCATCGATTATTATGGGTCGTTCAATTTTCCTTTCCGATACCTCAAGACGTTAGATAACTCTGTGGCCTCCCTCCCAGACACAATCTGTAACTCCACCATGTACCCTTCCCTCTGCAAAACTGTGCTGGGCAATCAAAACGGCACTGTCTTTGACTTTGGCCGCATATTTCTTCAAAAGTCCTTATATCAGTCTAGTGTATTCCTGAATCAGGTGGATTCCTATCTGGAATCTCCATCCTCTCTTTCTCAGCCCACCATTGGAGCCCTTCAAGACTGTCACTTCCTCGCAGAGCTGAACTTGGAATTCTTATCCGACGCCCTCGACTCTGTCCAAAACCTTAACGATTTCCTTTCTTCCTCTCGAGCGGAAGACCTTGAAGCATTGCTCAGTGCAGTGCTGACCAACCAGCAAACATGTCAGGATGGCCTACAAACCACAGCTACCGATGGAAGAGTAAAGGACGACGTTTCTTCCTCCCTCTCTAACGACACCCAGATTCACAGCGTGTCTCTTGCTCTGTTCAACAAAGGGTGGGTTCCACACAAGAATATCACAACATCATGGCCAAAAAAGGGTCGCTTGCCAATGATAATGTCGCCCCAAATAGAGGCCATGTTCCACCCCACAAGAAGCCACGGCAGAAGACTGCTGCAGTCCGTGAACCAAAGTGTGGTGGTCAACGGCATGGTGGTAGTGAGTCAGGATGGAAGCGGAAATTTCACCACCATCAACGATGCCATCAATGATTCCCCTAATAATACTGCTTCCGGAAATGGTTACTTCATGATCTACGTCACGGAGGGTGTATACCAAGAATACGTCTCCATTCCCAAATACAAAACATACTTGATATTCGCAGGAGACGGCATTAACCGCACCATCATCACCGGCGACCACAACGTCGTCGACGGCTTCACAACATTCAACTCTGCCACATTTGCGGTGGTGGCACAGGGATTCGTGGCAGTGAACATAACATTCCGTAACACTGCGGGGCCCAGCAAACACCAAGCCGTTGCCTTGAGAAGCGGAGCCGACCTGTCCGTGTTCTACAAATGCAGCTTCGAAGGGTACCAAGACACACTCTACACCCATTCTATGAGACAGTTCTACAGAGAATGTGACATATACGGCACCGTCGACTTCATATTCGGCAACGCTGCCGTGGTTTTCCAAAACTGCAACCTCTATCCACGTCTTCCATTGAGTGGTCAGTTCAACACCATCACGGCTCAGGGAAGAACGGACCCCAATCAGAACACAGGCACCTCCATACAAAACGCCACCGTAAAACCCGCCGACGACTTGGCTCCGGCGGTGGCGACGGTGAAGACTTACCTGGGTAGGCCGTGGAAGGAATACTCGTTGACTGTCTTCATGGAGTCTTGGATGGACAGTTTCATCGATCCTGCTGGCTGGCATGACTGGAATGGCACCTTTGCTTTGAGCACTTTGTACTACGCCGAGTTTAATAACAGTGGGCCCGGTGCTGACACCACAAACAGGGTGACGTGGCCTGGTTACCACGTCATCAATGCCACGGATGCTGTCAATTTCACTGTGTCCAACTTCTTGGTGGGGGATGCTTGGTTGCCTCCAACTGGAGTCCCATACTATCCTGGACTTGCCTCCTTTAGCTAA 1701 0.4991 MLRYEIIPTYSSVDKIYPRLIDYYGSFNFPFRYLKTLDNSVASLPDTICNSTMYPSLCKTVLGNQNGTVFDFGRIFLQKSLYQSSVFLNQVDSYLESPSSLSQPTIGALQDCHFLAELNLEFLSDALDSVQNLNDFLSSSRAEDLEALLSAVLTNQQTCQDGLQTTATDGRVKDDVSSSLSNDTQIHSVSLALFNKGWVPHKNITTSWPKKGRLPMIMSPQIEAMFHPTRSHGRRLLQSVNQSVVVNGMVVVSQDGSGNFTTINDAINDSPNNTASGNGYFMIYVTEGVYQEYVSIPKYKTYLIFAGDGINRTIITGDHNVVDGFTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVALRSGADLSVFYKCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPLSGQFNTITAQGRTDPNQNTGTSIQNATVKPADDLAPAVATVKTYLGRPWKEYSLTVFMESWMDSFIDPAGWHDWNGTFALSTLYYAEFNNSGPGADTTNRVTWPGYHVINATDAVNFTVSNFLVGDAWLPPTGVPYYPGLASFS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2576 566 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 196 IPR035513 -
Mibi06g2576 566 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Mibi06g2576 566 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 196 IPR035513 -
Mibi06g2576 566 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Mibi06g2576 566 SMART PMEI_2 40 193 IPR006501 GO:0004857
Mibi06g2576 566 SUPERFAMILY Pectin lyase-like 245 561 IPR011050 -
Mibi06g2576 566 FunFam Pectinesterase 243 562 - -
Mibi06g2576 566 CDD PMEI-like_3 47 198 - -
Mibi06g2576 566 Pfam Plant invertase/pectin methylesterase inhibitor 45 193 IPR006501 GO:0004857
Mibi06g2576 566 Gene3D - 248 564 IPR012334 -
Mibi06g2576 566 PANTHER PECTINESTERASE 46 552 - -
Mibi06g2576 566 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 196 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2576 Mibi-ChrMibi06 45882733 45886662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2576 47 564 Carbohydrate Esterase AT4G02330 57.615 0.0 623