Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2575 ATGTCTCATCATAGTGTTACACTCTCCGTTTTCCTTCTGCTTTCCTTGTTGGCATTGTCATCTCTAGCAGATAATCATGTGGCCTCCCTCTTAACCCCTCCAGACACAGTTTGTGACTCCACCATGTACCCTCCCCTTTGCAAAACCCTGCTTGGCACTCAAAACGGCAACGTCTTTGACTTTGGCCGCATCTTTCTCCAAAAGTCATTATCCCAGTCTCGTATATTCCTTCACCTGGTTGATTCCTACCTCCAATTTCCATCCTCTCTTTCCCATCCTACCATCGGAGCCCTCCAGGACTGTCTCTTCCTCTCAGAGCTCAACTTTGAGTTCTTATCCGACGCCTTGAATGCTGTTCAAAATTTGAATGGTTTCCTGCCTTCTTCTCAAGCAGAAGACCTTGAAACCATACTCAGTGCCGTTCTGACCAACCAGCAAACATGTCAGGATGGCCTCCTAACCACCTCTTCCGATGGAAGAGTGAAGGACGATCTTTCTTCCTCCCTCTACGACGACACAAAGCTCCACAGCTTGTCTCTTACACTCTTCAACAAAGCATGGGTTCCACACAAGAATATCAAAACCTCATGGCCAAATAAAGGGATACATCGGGAATTCAGCAATGGTCGTTTGCCATTGAAAATGTCACCACGAGTACAGGCCATTTTCGACTCAGCAAGAAGGCACGGCAGAAAACTGCTTCAGTCCTCCGACGAAAGCGTGGTGGTCAACGACATCGTGGTAGTGAGTCAGGATGGAAGCGGAGACTTCACCAACATCAGCGACGCCATCAATGCCGCCCCTAACAACACTGCTTCTGGTTCCGGTTACTTCTTGGTTTATATCACGGAGGGAGTGTACCAAGAATACGTCTCCATTCCTAAGTACAAAACCTACTTGATGTTCGTGGGAGATGGAATCAACCGCACTATCATCACCGGCAACCACAACGTGGTCGACAATTATACAACATTCAACTCTGCCACATTTGCGGTGGTGGCACAGGGATTCGTGGCGGTGAACATTACATTTCGTAACACCGCAGGGCCGAGCAAGTTTCAAGCCGTTGCCATGAGAAGCGGAGCTGACTTGTCCGTGTTCTATAGCTGTAGCTTCGAGGGCTATCAAGACACACTCTACACCCATTCTTTCAGACAGTTCTACAGAGAATGTGACATATACGGCACCGTCGACTTCATATTCGGCAACGCCGCCGTGGTTTTCCAAAACTGCAACCTCTATCCACGTCTTCCTTTGAGCGGTCAGTTCAACACCATCACGGCTCAGGGCCGAACCGACCCCAGTCAGAACACAGGCACCTCCATACAGAACGCCACCGTAAAACCCGCCGACGACTTGGCTCCGGCGGTGGCGACGGTGAAGACTTACCTGGGTAGGCCGTGGAAGGAATACTCGTTGACTGTCTTCATGGAGTCTTGGATGGACAGTTTCATCGATCCTGCTGGTTGGCACGACTGGAATGGCACCTTTGCTTTGAGCACTTTGTACTACGCCGAGTTTAATAACAGTGGGCCCGGTTCTAACACCACCAACAGGGTGACGTGGCCTGGTTACCACGTCATCAATGCCACTGATGCGGTCAATTTCACTGTGTCCAATTTCCTGATGGGTGATGCTTGGTTGCCTCCAACTGGGGTTCCTTACTATTCCGGACTTGCTTCCTAA 1686 0.4982 MSHHSVTLSVFLLLSLLALSSLADNHVASLLTPPDTVCDSTMYPPLCKTLLGTQNGNVFDFGRIFLQKSLSQSRIFLHLVDSYLQFPSSLSHPTIGALQDCLFLSELNFEFLSDALNAVQNLNGFLPSSQAEDLETILSAVLTNQQTCQDGLLTTSSDGRVKDDLSSSLYDDTKLHSLSLTLFNKAWVPHKNIKTSWPNKGIHREFSNGRLPLKMSPRVQAIFDSARRHGRKLLQSSDESVVVNDIVVVSQDGSGDFTNISDAINAAPNNTASGSGYFLVYITEGVYQEYVSIPKYKTYLMFVGDGINRTIITGNHNVVDNYTTFNSATFAVVAQGFVAVNITFRNTAGPSKFQAVAMRSGADLSVFYSCSFEGYQDTLYTHSFRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPLSGQFNTITAQGRTDPSQNTGTSIQNATVKPADDLAPAVATVKTYLGRPWKEYSLTVFMESWMDSFIDPAGWHDWNGTFALSTLYYAEFNNSGPGSNTTNRVTWPGYHVINATDAVNFTVSNFLMGDAWLPPTGVPYYSGLAS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2575 561 CDD PMEI-like_3 36 187 - -
Mibi06g2575 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 186 IPR035513 -
Mibi06g2575 561 SUPERFAMILY Pectin lyase-like 243 558 IPR011050 -
Mibi06g2575 561 SMART PMEI_2 29 182 IPR006501 GO:0004857
Mibi06g2575 561 FunFam Pectinesterase 240 559 - -
Mibi06g2575 561 Pfam Pectinesterase 247 545 IPR000070 GO:0030599|GO:0042545
Mibi06g2575 561 Gene3D - 245 561 IPR012334 -
Mibi06g2575 561 PANTHER PECTINESTERASE 19 549 - -
Mibi06g2575 561 Pfam Plant invertase/pectin methylesterase inhibitor 36 163 IPR006501 GO:0004857
Mibi06g2575 561 ProSitePatterns Pectinesterase signature 2. 393 402 IPR033131 -
Mibi06g2575 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2575 Mibi-ChrMibi06 45872892 45875235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2575 6 561 Carbohydrate Esterase AT4G02330 56.499 0.0 645