Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2574 ATGGCCTTGGTGATTTTCCTCCTCCTCCTTCCTGCGTTAGCTTTTGCAGAAATTCTCTCACCTGCAACTCTATGCCAACATACAATTGAACCTTCTTACTGCGTGTCCTTGCTTCCTCTTCAAAATGCCACTTTCCATGACTCGTGTCGCTTCTCTCTCCACCACTCCTTATTGAGAACCCGGAAATTCTTGAACTCCCTCGACCAACTCCTTCAATACAGCTCTTCTTTGTCCTCTGTAGCTGTCGCTGGCCTTGAAGATTGTCGAACGCTTGCCGACCTGAACGTAGATTTTCTCTCAACTTCCTTGCAAACTGTGAATAATAAGGGAGTGTTTTTGTCTGATGCTGAAGTTGAAAGTGTTCAAACCATGCTTAGTGCTGTTTTAACTAACCATGAAACCTGCTTGGAGAGCCTTCAAGACGGTGCTGCTTCTTCTCATCCGGGCCTTGTAAAAGGGATGCCCTTCTCACTTTTTGATTACAAGAAGCTTTATGGGGTCTCTTTATCCCTTTTCATGAAGGGTTGGGTGCATATCAGTAAGCCAAAACCTGAATTATCGTGGCACCAACCTCCCCATATGCAAGCTGTGTTCCAAAATGGTCATTTGGCTCTCACGATGTCCAACAGGACACGTGCTATCTTTGAGGCCTCTAGTGGTAGAAAACTAGACACAACTTTCGCAGCTACCCACACGGCATTTGTGAGAGATATTGTGACGGTGAGCAAAAATGGAAGAGGTAACTTCACCAAGATCAACGATGCTCTTTCTGCAGCTCCCATCAAAACTTCCTCTTCAAAAGGCTACTTCGTGATCTATGTCTCAGCTGGAGTTTATGAAGAATACATCTCCATAGATAAGAAAAAGACGTACTTGATGATGATAGGAGATGGCATCAACAAAACTGTCATCACAGGCAATCGTAGCCATGGAGATGGGTACCAAACCTTTAGATCGGCAACTTTTGCTGTGCACGGGAAGGGATTTGTAGGCGTGAATATAACATTTCGAAACACAGCTGGGCTGGAGAAGCACCAAGCAGTGGCACTGAGAAACTCAGCAAATTTGTCTGTGTTTTATAGTTGCAGTTTTGAGGGATACCAAGACACACTCTACGCACATTCCATGAGGCAATTTTATAGAGAATGTGATATATACGGCACTGTGGATTTCATATGTGGGAATGCAGCAGCTGTGTTTCAGAACTGCAACATTTATATTCGTAAACCAATGAAAAATCAATCTTTCAATGTCATCACAGCACAAAGTCGAGACAATGATGATCAAAATACAGGTTTCTCAATGCATAAATGCACAATTAGAGCAGCAGAGGATTTGTCAGGGGCAACAACATACCTGGGAAGACCGTGGAAGCCACTGTCAAGGACAGTTTACATGGAGAGTTTCATGGATAACATCATAAATGTGGCCGGATGGCACGTATGGGATCATGATAATGAAAGTCGCTTGAACAGTTTGTATTATGCCGAGTATAATAATTTAGGGCCCGGGTCCAACACCTCACATCGGGTCACGTGGAAAGGTTATCATGTCATCAACTATTCCATTGCTGCTAATTTTACTGTCTCTAGGTTCTTGTATGGGGGTCATTGGTTGTCCCACACTGGTGTCCCCTATACTAGTCAATTAATTAACTAG 1659 0.4364 MALVIFLLLLPALAFAEILSPATLCQHTIEPSYCVSLLPLQNATFHDSCRFSLHHSLLRTRKFLNSLDQLLQYSSSLSSVAVAGLEDCRTLADLNVDFLSTSLQTVNNKGVFLSDAEVESVQTMLSAVLTNHETCLESLQDGAASSHPGLVKGMPFSLFDYKKLYGVSLSLFMKGWVHISKPKPELSWHQPPHMQAVFQNGHLALTMSNRTRAIFEASSGRKLDTTFAATHTAFVRDIVTVSKNGRGNFTKINDALSAAPIKTSSSKGYFVIYVSAGVYEEYISIDKKKTYLMMIGDGINKTVITGNRSHGDGYQTFRSATFAVHGKGFVGVNITFRNTAGLEKHQAVALRNSANLSVFYSCSFEGYQDTLYAHSMRQFYRECDIYGTVDFICGNAAAVFQNCNIYIRKPMKNQSFNVITAQSRDNDDQNTGFSMHKCTIRAAEDLSGATTYLGRPWKPLSRTVYMESFMDNIINVAGWHVWDHDNESRLNSLYYAEYNNLGPGSNTSHRVTWKGYHVINYSIAANFTVSRFLYGGHWLSHTGVPYTSQLIN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2574 552 PANTHER PECTINESTERASE 13 540 - -
Mibi06g2574 552 SMART PMEI_2 16 171 IPR006501 GO:0004857
Mibi06g2574 552 SUPERFAMILY Pectin lyase-like 234 548 IPR011050 -
Mibi06g2574 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 172 IPR035513 -
Mibi06g2574 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 174 IPR035513 -
Mibi06g2574 552 Pfam Plant invertase/pectin methylesterase inhibitor 22 147 IPR006501 GO:0004857
Mibi06g2574 552 Gene3D - 232 550 IPR012334 -
Mibi06g2574 552 Pfam Pectinesterase 239 535 IPR000070 GO:0030599|GO:0042545
Mibi06g2574 552 CDD PMEI-like_3 23 176 - -
Mibi06g2574 552 FunFam Pectinesterase 232 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2574 Mibi-ChrMibi06 45868827 45870571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2574 3 552 Carbohydrate Esterase AT1G02810 52.265 0.0 571