Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2545 ATGGCTTGTTGTACCCTCACTCCATTACCTGTCAGACCCATGAAAGGAAGAAAAGTTCCGCCTTGTCACTGCTTATTCAAAATCGAGTCCTTCTCGTTGCTTTCAAAGGCTTCAGTTGAAAACTACACCTCGGAAGAGTTCGAGGCAGGGGGATACAAATGGACTCTATCCATATACCCAGCTGGCAACAACAAAAAAGGCGGTCATAATCATATCTCACTGTATCTGAATTTGATGGTTTCAAGCTCAAGCTCACTTCCTGTTGGCTCGGAGGTCAATGCCATTGTAAATTTATTTGTGTATGATTTCCTCCGTGACGAGTATTTTTCTTATCAAGACGCAAGCACAAGGCAATTTCATAAGCTGCAAACTGAATGGGGTATCTCAAAATTCATGGACCTCGTCTCGTTCAATGACCCTTCAAACGGATATCTGGTTGGGGATGCCTGCGTTTTCGGAGCCGAAATCTTTGTCATAAAGCCTCATTCCAAAGAAGAATACTTATCAATGATAGATGAACCTCCTCCTCTGTCTTATAGGTGGAAATTCGACAACTTTTCAAATCGTGGTTCAGAAAAGTACGAGTCCGAACTCTTCCTTGCTGGAAACTATAGATGGAAACTCGTTTTCTCCCCTAATGGGACAGCTGAGGGCAAAGGCAACAGTATCTCACTGTTTCTGACCGTGGACGCATCTTCAATTCCACCTAACACTAAATTATATGTGCACTGCATTTTGCGTGTTAAGGATCAAATGAAGGGACAGCATGCTGAAACAAAATTCTACAGGCACTTCTCAAGCTCGAATCCCACATGGGGATCATCAAAGCTCGTGCCATTGGCCCGACTCAAGGATCCTGCGAAGGGGCTTTTAGAAGCAAATAGCTGCATCCTCGAAACGGAGTTCAAAGTTCTGGGCTTAGGGAAGAGCTATGGGAAGAGGAACAGTAGCAGTGGAAGACGAAGTGTGAGCAAGGAAGCGACCAAAATGAAGGGAACACTAGCTAGGCACTTGCAGAATCAGCTAGGGCAACCATCCCTCTTTCCCCTTCATCAACAGTCATCGTCTTCCGCCGTCCCTCGCTTCCAGAACCTTCTTGAAGCCGAAGCCCGTGACAGCAATCTTCCCTCATCTTCTCCTCACGCTCTCGATCATATGGTTGACGCCAATGTGGATGAGAAAGACTTCATCCTCAGCCAAGATTTCTTTTGCACTCCAGATTACATAACCCCGGATAATCAGTATATTTTTAACGGCTTCGACTGCAACAAGGAGAATATCCCATGTCCCAAGTCACCGGAAAAACTAAATACTACAAAAAGCAAGAGATGCCGATTGGATGGTATCTCAGGGAATCCTCTCAGCCCTACTATGTCTGTTGGTCATCAAGCTGTGGAGCTTGGAACTGAGTCTGCAGCAGATGAAGCAGATATTGAGAAATTGATTCCCAGTGGAAAACCAAAGGCTCAAAATTATCTATCACATTCTGTGGTTGCCTTGCGCTCTAGGGTCATACCCCCTCCTTGCTTTAGGAACCCCTATTTGATGGATGCTTTGGATAATGAGAAAGTTCCCTATGGGAACCAAAGATTAAAACATGCAGGTGTGTTCCCTGCAATCATTGGCGGTGATGGGCTTTCACGCTATCGCACTGACTTCCATGAGATTGAGCAAATTGGTATAGGAAACTTTAGTAATGTTTTCAAAGTTTTGAAGAGAATAGATGGTTGCTTGTATGCTGTGAAACACAGCACGAGACAGTTGTGCCAAGAAACAGAAAGGAGAAAAGCTTTGATGGAGGTTCAAGCACTGGCAGCCTTAGGATCCCATGAAAACATTGTGGGGTACTACTCTTCATGGTTTGAAAATGAGCGGCTGTACATTCAGATGGAGTTATGCGATCATAGCTTATCCATAAGCAAGTCTGATACAATTTTTATGGAAGCACAAGCATTAGAAGCACTGCATCAAGTTGCGAAGGCCCTGTTGTTTATACATGAAAGAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGCTGTGCAACTCTCCTCGATAAGAGTCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCTCAGGAAATCCTGAATGAGGATTATGATCACCTTGACAAGGTTGATATTTTTTCTTTGGGAGCTTCTATATTTGAGCTCATTCGAGGATCACCTTTGCCAGAATCAGGATGTAATTTTTTTAATCTGAAAGAAGGCAGGTTGCCGCTCCTGCCTGGCCATTCGTTGCAATTTCAGAACATGCTTAAGGTCATGATGGACCCTGATCCAGCTAAACGACCTAGTGCAAGAGAGTTAGTGGAGAACCCAATCTTTGGTTGGGCCTTAAGAAAGAACCGCTACGGTTTAAACAAACTCTATTCGCACATGAGAAAGATGTCATCGGAGAAGAGGGCAGAGCAGGCGGAAGCTTGTGGTGGTTCGGGCCAACTCGCCGGGAAGAAGCTGTCTTGGAGAAAGTTACCCACCAGATATGACTCTCTGGACATAGAATCTCGTACCTACTCCAATCCTAACGCTCATCGTCGTTCCTCCAAGTCGATGGCGGTGATGATGCAGCTGGCGTTTCAGAGCATAGGAATAGTGTACGGGGACATCGGAACGTCGCCGCTTTATGTGTACTCAAGTACCTTCACCGACGGTATCAACCACAACGACGACGTTTTGGGAGTTCTTTCCATGATCATTTACACCATCACTCTCATCCCTCTCATTAAATACGTCTTCATCGTTTTGAAGGCCAATGACAACGGCGACGGAGGGACATTCGCGTTATACTCTCTGATATGTCGTTATGCCAAAGTGGGGCTTATTCCGAATGTTCAATCCGAGGATGCGGCAGTGTCTAATTATCAGTTAGAGTTGCCTGATAGCTCCAGAATGAGGAGGGCTTCAAAGATTAAGTCTAAACTTGAGAGTAGCCACTTTGCCAAGCTATTCCTCTTGTTCGCTACTATGCTTGGCACTTCTATGGTCATTGGTGATGGTGTTCTCACTCCCTGCATTTCCGTTTTATCAGCTGTTGGGGGGATCAAACAGGCTGCTAAATCCATAAATGACGATGGGGTTGTTTGGATATCCGTTGCAATTCTGGTGTGCCTTTTTATGGTCCAAAGATTTGGAACTGATAAAGTGGGGTACAGTTTTGCTCCCATTATTTGTGTTTGGTTCGCCTTCATTGGAGGCATTGGCATCTTCAACTTCATCAAGTATGATCCAACAGTCCTCAAAGCCTTAAATCCCGCATACATTATGCAATATTTCAAAAGGAACAAGAAAGATGCTTGGATTTCTCTTGGTGGAGTTGTGCTATCCACCACAGGAACTGAAGCACTTTTTGCTGATGTTGGACATTTCAGTGTTCGATCAATCCAAATCAGTATGTGTTCTGTGACATACCCTGCCCTCATATTGGCTTACACCGGCCAAGCTTCCTTTCTTCGCAAACACAATGATCTTGTTGGAAATACCTTTTACGAGTCGATTCCAGGACCTTTGTACTGGCCAATGTTTGTGATAGCCGTGGCAGCAGCAATCATAGCTTCCCAAGCCATGATTTCTGGGACTTTCTCTATAATCCAACAATCCCTTTCACTGGGTTGCTTTCCACGTGTGAAGATCGTGCACACTTCTACCAAGTACGAAGGACAAGTTTACATACCCGAAATTAACTACATTTTGATGATAGCTTGTGTTGCCGTCACTCTTGGATTTAGAGACACCACCAAAATTGGCAATGCCTATGGGATAGCTGTGGTTTTTGTGATGACACTCACATCAGCTTTTCTCGTGCTGATCATGATCATGATATGGAAAACACATTTTCTGCTTATTATCGGTTACGTTGTTGTGTTTTATTCAGTGGAGCTTCTGTATTTAAGCTCAGTGTTATACAAATTTAACCAAGGAGGGTATCTTCCTCTTGCCTTCGCCGCGGTTCTCATGTCCATCATGTTCATTTGGAACGATGTGTACAGAAGGAAGTATCACTTTGAGCTGGACCACAAGATTTCTCCAGAGAAGCTTAGAGAAATTGCTTCTGACACACAAGTTTCCAGACTTCCTGGTTTGGGCCTGTTCTACTCTGAGCTCGTTCAAGGTATTCCACCTATTTTCCAGCATTATGTCACAAATGTGCCTGCACTTCACTCTGTGCTCGTCTTTGTGTCCATCAAGTCGTTACCTGTAAGCAAAGTAGCACTAGAAGAGAGATTCCTGTTTCGCCGGGTGGCACCCAAAGAACTCAATGTGTTCCGTTGTGTGGCAAGATATGGTTACACTGATGTGCGCAATGAGCAAGAGCCTTTTGAGACGTTATTGGTGGAAAAGTTGAAGGAGTTTATTTCAGGAGAGGTTTTGGTGTCACAGAGAGTACTAATAGAGAATGGTAATGATAATGAAGGTGGTGATAATGATGAGGAGAAATCAGAGGTTGAAAATGATAGAGTACAGGGAGAGTCTGATGGGGAAGAGATGAGACAACAAGAGGCTGTGAAGAGAGAGATAGAGGGAGTTGAGAGGGCAATGAGAGCTGGTGTTGTGCACTTGATTGGTGAGAGCGAGGTGGTTGCTAGAAAAGGAGCCAACATTGGGAAGAAGATTTTGATCAATCATGCTTACAACTTTCTCAAGAAGAACTTGAGACAGAGTGACAAAGTGTTTGATATTCCTCACAAGCGTTTGGTCAAAGTGGGTATGACTTATGAGCTTTAA 4788 0.4409 MACCTLTPLPVRPMKGRKVPPCHCLFKIESFSLLSKASVENYTSEEFEAGGYKWTLSIYPAGNNKKGGHNHISLYLNLMVSSSSSLPVGSEVNAIVNLFVYDFLRDEYFSYQDASTRQFHKLQTEWGISKFMDLVSFNDPSNGYLVGDACVFGAEIFVIKPHSKEEYLSMIDEPPPLSYRWKFDNFSNRGSEKYESELFLAGNYRWKLVFSPNGTAEGKGNSISLFLTVDASSIPPNTKLYVHCILRVKDQMKGQHAETKFYRHFSSSNPTWGSSKLVPLARLKDPAKGLLEANSCILETEFKVLGLGKSYGKRNSSSGRRSVSKEATKMKGTLARHLQNQLGQPSLFPLHQQSSSSAVPRFQNLLEAEARDSNLPSSSPHALDHMVDANVDEKDFILSQDFFCTPDYITPDNQYIFNGFDCNKENIPCPKSPEKLNTTKSKRCRLDGISGNPLSPTMSVGHQAVELGTESAADEADIEKLIPSGKPKAQNYLSHSVVALRSRVIPPPCFRNPYLMDALDNEKVPYGNQRLKHAGVFPAIIGGDGLSRYRTDFHEIEQIGIGNFSNVFKVLKRIDGCLYAVKHSTRQLCQETERRKALMEVQALAALGSHENIVGYYSSWFENERLYIQMELCDHSLSISKSDTIFMEAQALEALHQVAKALLFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNEDYDHLDKVDIFSLGASIFELIRGSPLPESGCNFFNLKEGRLPLLPGHSLQFQNMLKVMMDPDPAKRPSARELVENPIFGWALRKNRYGLNKLYSHMRKMSSEKRAEQAEACGGSGQLAGKKLSWRKLPTRYDSLDIESRTYSNPNAHRRSSKSMAVMMQLAFQSIGIVYGDIGTSPLYVYSSTFTDGINHNDDVLGVLSMIIYTITLIPLIKYVFIVLKANDNGDGGTFALYSLICRYAKVGLIPNVQSEDAAVSNYQLELPDSSRMRRASKIKSKLESSHFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQAAKSINDDGVVWISVAILVCLFMVQRFGTDKVGYSFAPIICVWFAFIGGIGIFNFIKYDPTVLKALNPAYIMQYFKRNKKDAWISLGGVVLSTTGTEALFADVGHFSVRSIQISMCSVTYPALILAYTGQASFLRKHNDLVGNTFYESIPGPLYWPMFVIAVAAAIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSTKYEGQVYIPEINYILMIACVAVTLGFRDTTKIGNAYGIAVVFVMTLTSAFLVLIMIMIWKTHFLLIIGYVVVFYSVELLYLSSVLYKFNQGGYLPLAFAAVLMSIMFIWNDVYRRKYHFELDHKISPEKLREIASDTQVSRLPGLGLFYSELVQGIPPIFQHYVTNVPALHSVLVFVSIKSLPVSKVALEERFLFRRVAPKELNVFRCVARYGYTDVRNEQEPFETLLVEKLKEFISGEVLVSQRVLIENGNDNEGGDNDEEKSEVENDRVQGESDGEEMRQQEAVKREIEGVERAMRAGVVHLIGESEVVARKGANIGKKILINHAYNFLKKNLRQSDKVFDIPHKRLVKVGMTYEL 1595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2545 1595 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 169 306 IPR008974 GO:0005515
Mibi06g2545 1595 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 21 167 IPR008974 GO:0005515
Mibi06g2545 1595 ProSitePatterns Protein kinases ATP-binding region signature. 559 582 IPR017441 GO:0005524
Mibi06g2545 1595 SUPERFAMILY Protein kinase-like (PK-like) 547 797 IPR011009 -
Mibi06g2545 1595 FunFam WEE protein kinase 543 631 - -
Mibi06g2545 1595 SMART serkin_6 553 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2545 1595 CDD MATH 177 303 IPR002083 GO:0005515
Mibi06g2545 1595 CDD MATH 26 156 IPR002083 GO:0005515
Mibi06g2545 1595 MobiDBLite consensus disorder prediction 1500 1520 - -
Mibi06g2545 1595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Mibi06g2545 1595 MobiDBLite consensus disorder prediction 1488 1520 - -
Mibi06g2545 1595 Gene3D Phosphorylase Kinase; domain 1 544 631 - -
Mibi06g2545 1595 ProSiteProfiles MATH/TRAF domain profile. 21 156 IPR002083 GO:0005515
Mibi06g2545 1595 Gene3D Transferase(Phosphotransferase) domain 1 632 799 - -
Mibi06g2545 1595 SMART math_3 26 137 IPR002083 GO:0005515
Mibi06g2545 1595 SMART math_3 181 283 IPR002083 GO:0005515
Mibi06g2545 1595 Pfam Protein kinase domain 553 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2545 1595 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 870 1594 IPR003855 GO:0015079|GO:0016020|GO:0071805
Mibi06g2545 1595 TIGRFAM kup: potassium uptake protein 879 1594 IPR003855 GO:0015079|GO:0016020|GO:0071805
Mibi06g2545 1595 SUPERFAMILY TRAF domain-like 19 166 - -
Mibi06g2545 1595 ProSiteProfiles MATH/TRAF domain profile. 176 302 IPR002083 GO:0005515
Mibi06g2545 1595 FunFam Wee1-like protein kinase 632 800 - -
Mibi06g2545 1595 ProSiteProfiles Protein kinase domain profile. 553 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2545 1595 SUPERFAMILY TRAF domain-like 174 305 - -
Mibi06g2545 1595 Pfam K+ potassium transporter 880 1453 IPR003855 GO:0015079|GO:0016020|GO:0071805
Mibi06g2545 1595 Pfam MATH domain 31 158 IPR002083 GO:0005515
Mibi06g2545 1595 Pfam MATH domain 184 303 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2545 Mibi-ChrMibi06 45651997 45665099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2545 821 1595 Inorganic Solute Cotransporters AT4G13420 57.484 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Mibi06g2545 K_trans 3.4e-195 CL0062