LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g2541	ATGGAGGTTTCGAAAGACGAATTTTCGGAGCTAGAGATTGGTAATTCAGTGGAGTCTTTCCAGAAATTCCTCGTTTTGCAGAGGGAGCTCTTTCACAGCCAGATCGATCAGCTTCAGAAAATCGTCGTTACGCAATGCAAACTCACTGGTGTCAATCCTCTGTCTCAAGAAATGGCAGCTGGCGCTTTGTCAATAAATATTGGTAAAAGACCCAGGGATTTGTTAAATCCAAAAGCTGTAAATTACATGCAATTAGTATTCTCCATTAAAGATGCTATCAGTAAGAAAGAATCTCGTGAGATCAGTGCTTTATTTGGCGTTACAGTGACACAGGTTCGTGAATTTTTCAATATTCAACGTTCAAGAGTGAGAAGACAAGTTCGGTTATCAAGAGAAAGAGTGTTAAGATCTAACTACTGTGAAGAACCTCGTGATGAGTTCCCAATATCATCTGATTCTATGATACCAATTAGTCCCGCTCCCTTGAACTCTTCTGGTCCTGTCAGCATAGAAGAAGCCTCCTGCTCAACCCTGGAGACTTCATTTTCTGGCCTAAACGTCTCAGAGAAACATTTTGTTGATAATATTTTTAGTTTAATGCGGAAAGAGGAAACATTTTCAGGTCAGGTGAAATTGGTGGAGTGGATATTGAAGATACAGAATACTTCAGTACTAATTTGGTTTTTAGGCTGTGGAGGTGTGATGATTTTAGCAGCTTGGTTGAATGAAGCAGCTGTTGAGGAGCAAACAAGTGTTCTTCTTCTTATTTTAAAGGTCCTTTGTCATTTGCCTCTACATAAAGCTCTTCCTACGCATATTTCAGCTGTATTGCAGTGTGTTAATAGACTTCGTTTTCACAGAACATCAGACATATCAAACAGGGCACGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCGAAGAACCAAGCAACAAAGAAAACCACTGGTGTTAAACATGGTTGTGAGGATCAAAAGGAGATGGTTGGACAGAGGGTTTGTCAAATTATGGGCAATGAATCATGGAATTCAAATGTCGATATTCCTGAGGACATTCTTGCCCTTTCAAATGATGGTTCAGACGATTTCAGGAAATCAGAAGCTCCACAAACTGTGAAATTATTGACAGGTTCTTCGGATGATTCTACTAAGAAGTCTGTTCTAGGTTTATCAATGTCTCAAACTAGGGAGCGCAGAAAAGTGCAGTTAATGGAGCAGCCTGACCAAAAGACAGTGAGCAGAAGCCCTCAAGCTGTAAGAGTAGGGCCTGTAAGTAAAGGTCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAAAGCAAGTATGGGAAACGTGGTTCATCTAAAGGAAGTAAAGAAGCAAAGACTGATGGTCTGAATAAACCTCAGGCAAATCAGGCTCGTCTTGGGGTTGGGGCTTCCTTATCTAAAGCTCCTGTATTAACCAAAACCGATGAAGGCAGCAAACCTCTTTTGCTTCCTTCGAATACTTCTAATATGAATGATGCTTCTTCTGGATCATATTCAAGAATGAATTTGAAGGAATCTTTCTGGGAGAAGTGCAAGCAGGTGCAAATCCCATGGAAGACACCGGCAGAAGTGAGACTTCATGATACCTGGAGAGTTGGTGCCGGTGAAAACAGCAAAGAGACTGATGTTCAGAAAAGCAGAAATCGGAGGGGGGAGGAGATAATTTATCGGATTATCCAAGAGATACCGCTTAATCCCAATGAGCCATGGGACCTGGAAATGGATTATGATGACTCATTGACGCCACCAATTCCTATTGAACAGCTTCCTGATGCTGATGGCGCTGAAACATCTGCTGCCTCTAATGAAGGTATTCAAGTGGCAACCCCTTCATCTTCAAACGCTAATGCAAATGTTGCTGAACCTGATCTTGAGCTGCTTGCTGTTCTTCTTAAAAATCCTGAGTTGGTGTTCGCATTGACTTCTGGGCAAGGCGATAATATACAGAGTGCGGAAACAGTGAAGCTGCTTGATATGATCAAAAGAGGTGGTGTCCATTTGGCGGACAATAATGGCAGCATTGGTGGAGAGGCCCAGGAGAAGGTGGAAGTTTCTCTTCCTTCTCCAACTCCTTCTAACGATCCAAGAACGAGTGGTTGGACGACAGAAGTTGCAAAGAATCCTTTTTCACGCCACAACTCGGTGCCTGACAGAAGTATCAGCTTTCCAGCTGCTGCAACCAACATGGTACTGCCGCAGGTTCCAGCAGTCCCTGGCATGGCAGTACGACAACATCAAACTGATTCACTGTCTCTAGCACCTAATGTTGTTTCTGCTCTTTCCTCTGTGCATCCGACTCTGCTTACCAATTCTCCAACAACACAAATGCTAGCATCAAACATAGGTTTAAGTACCATGATGAACGACATAATCCCTGCTAATGCATCGTCTGTTTTAGGAGCAATGCGGGTAGATAACACCAATATTAGTAATGTAAAACCAATAGCTAATTTGAGAATACAAGAGGGATTGTCTAATTCACATTTGCAATCTTATGAGCTGCCATCTCCAACGCCAACACCAGCACCAACGCTATCCAGTTCAGTCACACCCCCACAAAGGCATACTCATTTATTGCAGCAGCCCCATTTTTATGAGCCTTCCTTGTACAACTCTCTACATTCCTACCCTCCTCCAATGGAAAAACAAGGTCATGTTTCAGAGCCTTGGAGAGTTAGGCAGGATACATCCTCCAGTTATCATTCTCAAGTAAATCAAAACACTTATAACGCATCAGTTGAAAGATCCAAGCGATCCAGTTCTTCTTGGGAGAGAAATGATTATGGAGGTGGTGGAGGAGACTATGAATCATGGAGTCCAGATAATAGTCCAAGTAGAAATAATGGATATGCTAGGGGAAGAGGTTTCCCTGATTCCAGAATGAACCCTGGGAGGAACTATAGGCCTGAATTGTCAAGACATCGGGGTTCGTCTGGTTATTGGGATCCTAATAGACAAGGAAGAAGAAAGTGGCATGATTAG	3033	0.425	MEVSKDEFSELEIGNSVESFQKFLVLQRELFHSQIDQLQKIVVTQCKLTGVNPLSQEMAAGALSINIGKRPRDLLNPKAVNYMQLVFSIKDAISKKESREISALFGVTVTQVREFFNIQRSRVRRQVRLSRERVLRSNYCEEPRDEFPISSDSMIPISPAPLNSSGPVSIEEASCSTLETSFSGLNVSEKHFVDNIFSLMRKEETFSGQVKLVEWILKIQNTSVLIWFLGCGGVMILAAWLNEAAVEEQTSVLLLILKVLCHLPLHKALPTHISAVLQCVNRLRFHRTSDISNRARVLLSKWSKLLAKNQATKKTTGVKHGCEDQKEMVGQRVCQIMGNESWNSNVDIPEDILALSNDGSDDFRKSEAPQTVKLLTGSSDDSTKKSVLGLSMSQTRERRKVQLMEQPDQKTVSRSPQAVRVGPVSKGRPMSADDIQKAKMRALFMQSKYGKRGSSKGSKEAKTDGLNKPQANQARLGVGASLSKAPVLTKTDEGSKPLLLPSNTSNMNDASSGSYSRMNLKESFWEKCKQVQIPWKTPAEVRLHDTWRVGAGENSKETDVQKSRNRRGEEIIYRIIQEIPLNPNEPWDLEMDYDDSLTPPIPIEQLPDADGAETSAASNEGIQVATPSSSNANANVAEPDLELLAVLLKNPELVFALTSGQGDNIQSAETVKLLDMIKRGGVHLADNNGSIGGEAQEKVEVSLPSPTPSNDPRTSGWTTEVAKNPFSRHNSVPDRSISFPAAATNMVLPQVPAVPGMAVRQHQTDSLSLAPNVVSALSSVHPTLLTNSPTTQMLASNIGLSTMMNDIIPANASSVLGAMRVDNTNISNVKPIANLRIQEGLSNSHLQSYELPSPTPTPAPTLSSSVTPPQRHTHLLQQPHFYEPSLYNSLHSYPPPMEKQGHVSEPWRVRQDTSSSYHSQVNQNTYNASVERSKRSSSSWERNDYGGGGGDYESWSPDNSPSRNNGYARGRGFPDSRMNPGRNYRPELSRHRGSSGYWDPNRQGRRKWHD	1010

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	446	514	-	-
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	599	618	-	-
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	374	397	-	-
	Mibi06g2541	1010	SMART	HOX_1	68	130	IPR001356	GO:0003677
	Mibi06g2541	1010	SUPERFAMILY	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	229	315	IPR035441	-
	Mibi06g2541	1010	Gene3D	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	233	319	IPR035441	-
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	886	1010	-	-
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	496	514	-	-
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	374	431	-	-
	Mibi06g2541	1010	PANTHER	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	106	995	-	-
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	907	934	-	-
	Mibi06g2541	1010	ProSiteProfiles	'Homeobox' domain profile.	66	126	IPR001356	GO:0003677
	Mibi06g2541	1010	MobiDBLite	consensus disorder prediction	846	872	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g2541	Mibi-ChrMibi06	45595159	45603849	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g2541	6	732	Homeobox Transcription Factor Family	AT4G02560	51.131	0.0	691