Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2523 ATGTCGTTTAGGAGTATAATCCAGGATATAAAGGGCGAATTTGGGAGTATTTCAAGGAAAGGATTTGAGGTGAAGTTTGGGAGATCGCGGTCACAGTCATACCGCGATGCTGGAGATCATCATGTGATGGTTGCCGATGGTTTGAGGCAGAGTTGTTGGGCTAACATGCCCCCGGAGCTTCTGAGGGATGTGCTTATGAGGATTGAGGCCTCTGAAGATACTTGGCCGTCCCGAAAACATGTGGTTGCTTGTGCTGGTGTCTGCCGCAGTTGGAGAGAAATCATGAAAGAAATTGTGAAATCTCCTGAATTATCTGGCAAGCTCACACTGCCAATCTCCTTGAAGCAGCCTGGTCCAAGGAACTCCCTTCTTCAGTGCTATATTAAACGTAATCGCAGTAATCAAACATATTATCTGTACCTCAGTTTAAACCAAGCTTCAATTGACGATGGCAAGTTCCTTCTTGCTGCACGCAAGTGTCGACGTCCTACCCATACAGACTATATCATTTCTATAAACTGTGATGATGTTTCAAGAGGGAGTAGCACTTACATTGGAAAGTTGAGGTCAAACTTTCTAGGTACCAAATTCACAGTGTATGATGCGCACCCTCCAATTTGTGGTGCCAAAGTGACTAAATCTCGTTCAACTAGACCAGTTAGTCTCAAGCAAGTGTCTCCAAGAGTTCCTGCTGGCAACTATCCCATTGCGCATGTCTCATATGATCTGAATGTCCTGGGCTCCAGGGGCCCAAGGATAATGCACTGCGTTATGGATGCCATCCCAGCTTCAGCTGTTGAGCCAGGAGGTGTGGCCCCTACACAAACTCAATTCCTGCATAGCAGAATTGAGACTTCTCCATCTATTCCTTTCTTTAGATCAAAATCAACTCGCCTGGAAAACTTCCAATCAGTACCTTTGTCTTCCCAAAACAAGGGAATGCTGGTATTGCAAAACAAGTCCCCTAGGTGGCATGAGCAGCTCCAGTGCCCAGGAAAATGTTATTCTTCAGTTTGGAAAAGTGGGGAAAGATTTGTTCACGATGGATTATCAGTATCCAATCTCTGCGTTCGAAGCATTTGCAATATGTCTTAG 1095 0.4521 MSFRSIIQDIKGEFGSISRKGFEVKFGRSRSQSYRDAGDHHVMVADGLRQSCWANMPPELLRDVLMRIEASEDTWPSRKHVVACAGVCRSWREIMKEIVKSPELSGKLTLPISLKQPGPRNSLLQCYIKRNRSNQTYYLYLSLNQASIDDGKFLLAARKCRRPTHTDYIISINCDDVSRGSSTYIGKLRSNFLGTKFTVYDAHPPICGAKVTKSRSTRPVSLKQVSPRVPAGNYPIAHVSYDLNVLGSRGPRIMHCVMDAIPASAVEPGGVAPTQTQFLHSRIETSPSIPFFRSKSTRLENFQSVPLSSQNKGMLVLQNKSPRWHEQLQCPGKCYSSVWKSGERFVHDGLSVSNLCVRSICNMS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2523 364 PRINTS Tubby superfamily signature 168 184 IPR000007 -
Mibi06g2523 364 PRINTS Tubby superfamily signature 233 260 IPR000007 -
Mibi06g2523 364 PRINTS Tubby superfamily signature 184 208 IPR000007 -
Mibi06g2523 364 PRINTS Tubby superfamily signature 317 334 IPR000007 -
Mibi06g2523 364 Pfam F-box domain 53 99 IPR001810 GO:0005515
Mibi06g2523 364 SUPERFAMILY Tubby C-terminal domain-like 102 330 IPR025659 -
Mibi06g2523 364 SUPERFAMILY F-box domain 45 97 IPR036047 GO:0005515
Mibi06g2523 364 Gene3D Tubby Protein; Chain A 113 332 IPR025659 -
Mibi06g2523 364 PANTHER TUBBY-RELATED 38 330 - -
Mibi06g2523 364 Pfam Tub family 114 330 IPR000007 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2523 Mibi-ChrMibi06 45435022 45437142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2523 1 330 TUB Transcription Factor Family AT2G47900 73.874 4.70e-174 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mibi06g2523 Tub 9.2e-63 CL0395