Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2511 ATGGAACGTGAGCAGGATTTTGATTTTGGAAAAAAGATGAATGATAAGTTTGATTCTCCTGTTGGAGTTCTGGAGGACTATTTTGGAAGCACAGAGTCAGAAAGTAGCTGTTCCAATTCCAAAGAACCCACGGTAGGTTCTGGCTCTGAAGATGATAAGTCAAAACCTGCTTCTAAATGGCCTGGTTTCCTTCAATTGTTGAGGACCAGATCAAAGAAGCCTGTAGCCCCATTGCATCCCCTGAATGCCCTCAGGCTCTCCAAGAGATTCAGTCTTAGCATAATAGAGACAATACTGCGAAATCATCACATTGATGCAGATTCATCCCTCCACAGATCACCCCGCAAGATCTTTACCCACCATGACATTCAGATGGCAACCGATCATTTCAGCCAGAAGAATTTGATTGGAAAAGGAGGTTATGCTGAAGTGTACAAAGGGTGTTTGCGAAATGGTCAGCTGGTAGCCATTAAAAGGCTAACTCGAGGAACCCCAGATGAGATCATTGGGGATTTTTTAATGGCGCATGTGAATCACCCCAACACTTGTAAGTTGGTTGGCTATGGAGTGGAAGGAGGAATGCATCTTGTCCTTGAATTGTCTGAAAAGGGGAGCTTGACTTCATTGCTTTATGGTTCGAAGGAGAAACTACTATGGTGTGCAAGGCACAAAATTGCGTTGGGAACGGCCAAAGGTATATTTTATCTTCACGAGGTTTGTCACAGGAGAATTATCCACAGAGATATAAAGGCCGCAAATATATTGCTCGCTGAGGACTTTGAACCTCAGATTTGTGATTTTGGGCTGGCAAAATGGCTGCCAGAAAATTGGACTCATCACACCGTTTCAAAATTTGAAGGGACTTTTGGCTACCTTGCTCCAGAGTACTTACTTCATGGCATAGTAGACGAGAAAACAGATGTATATGCCTTCGGTGTATTGCTTTTAGAATTGGTCACTGGGCGGCGAGCACTTGATTATTCACAGCAAAGCCTTGTTTTGTGGGCAAGACCATTGCTGAAAAAGAATGATATTAGGGAGTTGGTTGACCGTTCATTAGGCCAAGACTATGACCGTGTTCAGATTCACTTGATGCTGTTGGTAGTTTCTTTATGCATCCAACAATCCGCATTTCTTCGGCCCTCCATGAGACAGGCACGTTCTCCTGAAATTTCAGTACAACTTATATTATATATGCTCGTCATTCAGTATTGGCTGTTGGTTTTGCAGCTTCTGAACGGCAACCTTAGTGGCTGTAAGCACATGAAGAAAACTCGGCTCTCATTTAGTCGTAAAGTCTTAGAAGAAGAGCTCCTCCATTCTGAGCAGTAG 1332 0.4339 MEREQDFDFGKKMNDKFDSPVGVLEDYFGSTESESSCSNSKEPTVGSGSEDDKSKPASKWPGFLQLLRTRSKKPVAPLHPLNALRLSKRFSLSIIETILRNHHIDADSSLHRSPRKIFTHHDIQMATDHFSQKNLIGKGGYAEVYKGCLRNGQLVAIKRLTRGTPDEIIGDFLMAHVNHPNTCKLVGYGVEGGMHLVLELSEKGSLTSLLYGSKEKLLWCARHKIALGTAKGIFYLHEVCHRRIIHRDIKAANILLAEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVYAFGVLLLELVTGRRALDYSQQSLVLWARPLLKKNDIRELVDRSLGQDYDRVQIHLMLLVVSLCIQQSAFLRPSMRQARSPEISVQLILYMLVIQYWLLVLQLLNGNLSGCKHMKKTRLSFSRKVLEEELLHSEQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2511 443 PANTHER OS08G0249100 PROTEIN 16 426 - -
Mibi06g2511 443 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 202 391 - -
Mibi06g2511 443 Gene3D Phosphorylase Kinase; domain 1 99 199 - -
Mibi06g2511 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mibi06g2511 443 SUPERFAMILY Protein kinase-like (PK-like) 110 387 IPR011009 -
Mibi06g2511 443 Gene3D Transferase(Phosphotransferase) domain 1 202 394 - -
Mibi06g2511 443 Pfam Protein kinase domain 131 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2511 443 MobiDBLite consensus disorder prediction 1 19 - -
Mibi06g2511 443 MobiDBLite consensus disorder prediction 29 45 - -
Mibi06g2511 443 ProSitePatterns Protein kinases ATP-binding region signature. 136 158 IPR017441 GO:0005524
Mibi06g2511 443 MobiDBLite consensus disorder prediction 1 57 - -
Mibi06g2511 443 ProSiteProfiles Protein kinase domain profile. 130 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2511 443 SMART serkin_6 130 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2511 Mibi-ChrMibi06 45349679 45352196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2511 107 385 Trihelix Transcription Factor Family AT1G70460 42.321 2.05e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi06g2511 Pkinase 2.7e-36 CL0016