Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2501 ATGAAGATGATTCCCTGGGGTGGAGTCAGTTGCTGTATGAGTGCTGCTGCTCTTTACCTTCTCGGGAGAAGCAGTGGCAGAGATGCCGAAATTCTTAAATCCGTTACCCGTGTCAATCAGTTAAAAGAATTAGCACAACTGTTAGATGCTGAAATATTACCTCTGGTTGTTGCAATTTCGGGAAGAGTTGGCTCTGAAACCCCAGTTAGCTGTGAATTCAGTGGTTTGAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAACGATGCTGGTTCGTGGATACAAGATTCTGCTTTAATGCTATCCATGAGTAAAGAAGTTCCATGGTATCTGGATGATGGAACTGGTCGTGTTCATGTGGTTGGAGCTCGGGGTGCTACAGGTTTTGTACTACCTGTTGGAAGTGAGGCATTTGAAGAGTCAGGCCGATCACTTGTGCGGGGAACATTAGATTATCTCCAGGGCCTCAAGATGCTTGGAGTCAAGAGAATTGAACGAGTACTTCCAATTGGCACATCCTTGACAGTTGTTGGTGAGGCTGCTAAAGATGACATTGGAACCGTCAGAATTCAGAAACCCCACAAAGGGCCATTTTATGTCTCTCCAAAAACAATTGATCAGCTCATCGCCAATCTTGGGAAATGGGCAAGGTGGTATAAGTATGCATCCGTGGGCTTGACCCTTTTTGGTGCATATTTGATAGCCAAGCATGCTATTCAGTACATCTTGGAAAGACGCCGCCGCTGTGAACTGCAAAGGAGGGTTCTTGCTGCAGCTGCTAAGAGGTCAGGACAGGATAATGAAGGCGAAAAGGCTGACAGTTTACCAGATGGTGCAAAAAGGGATCGCATAATGCCAGATTTATGTGTAATATGCCTTGAGCATGAATACAATGCTGTTTTTGTTCCGTGTGGGCATATGTGCTGCTGTACTTCTTGTTCTTCCCACTTAACTAGCTGTCCTTTATGCCGGCGGCGGATAGAGCAGGTAGTGAAGACATATCGTCATTGA 1026 0.4542 MKMIPWGGVSCCMSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPLVVAISGRVGSETPVSCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRVHVVGARGATGFVLPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLTVVGEAAKDDIGTVRIQKPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTLFGAYLIAKHAIQYILERRRRCELQRRVLAAAAKRSGQDNEGEKADSLPDGAKRDRIMPDLCVICLEHEYNAVFVPCGHMCCCTSCSSHLTSCPLCRRRIEQVVKTYRH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2501 341 Pfam Zinc finger, C3HC4 type (RING finger) 292 335 - -
Mibi06g2501 341 FunFam E3 ubiquitin-protein ligase SP1 282 340 - -
Mibi06g2501 341 Pfam E3 Ubiquitin ligase 87 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Mibi06g2501 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 340 IPR013083 -
Mibi06g2501 341 ProSiteProfiles Zinc finger RING-type profile. 294 329 IPR001841 -
Mibi06g2501 341 SUPERFAMILY RING/U-box 293 335 - -
Mibi06g2501 341 CDD RING-HC_LRSAM1 293 332 - -
Mibi06g2501 341 PANTHER - 2 308 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2501 Mibi-ChrMibi06 45263082 45266124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2501 3 274 C3H Transcription Factor Family AT1G63900 78.102 2.65e-157 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2501 06 45263082 45266124 Mibi06g2501 06 45263082 45266124 ECH