Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2495 ATGAGCATCTCCATGGTAATGACCAGACAAATGACACAACCAGTAATCAATAGTCCTCCCAGCAACGGTCGAAAATTGAATCTGATCAATCTGCCACGGCAGAAAGAGAAGGTGGTGGTGGTGATGGGGGCCACCGGCGCCGGAAAGTCGAAGCTCTCCATCGACCTGGCCACCCTTTTCGATGCACAAATCATCAACTCCGACAAAATACAAGTCTACAAAGGCCTCGACATAGTCACAAACAAAATCACCAAGGAAGACCAAAAAGGCATACCTCACCATTTGTTAGGAACAGAGAACCCAAACTCAGAGTTCTCTGCCTCCCACTTCCGTGACGCTGCTTTACTCGCCATAGATTCAATTACGTCCTCAGGACAGCTTCCAATCATCGTAGGAGGATCCAATTCGTACATTGAGAAACTCATCGACGACGACGACTATCAATTCAGATCGAGGTATGATTTCTACTGCCTCTGGGTGGGCGTGTCAATGCCAGTGCTCGATCAATACGTGGCAAAACGGGTGGATCAAATGTTGGAGAATGGGATGGTGGATGAGCTGAGACCATTCTTCAATCCAAAGGGGGACTACTCGCGGGGGATTAGGAAGGCAATCGGGGTTCCAGAGTTCGATCAGTATTTTCGATACGAAACCCTAATTAGGGACGAAGGGATGAAACAGAGGGTGGTGGAGGGGGCGGTGAAGGAAATGAAAGAGAACACGCGCAAATTGGCGAGGAAGCAGTTAGGGAAGATAGAGAGACTGAGGAATGTGAAGAGATGGAAGATTCAGAGGGTGGACGCCACAAGCGTGTTCCGCAAGAATGGGGAAGAAGCAGAGGAGGCGTGGAAGAAGGTGGTGGCAGAGCCAAGTGCCTTGATGGTCGCCAGCTTTCTCTGTGATTTTCAGTCTTCCAATGTTGGCGGTGCCCTCAGACTGCCCTCGCCGGAAACCGCCATGGCTACTGCGACGTGCTGA 978 0.5051 MSISMVMTRQMTQPVINSPPSNGRKLNLINLPRQKEKVVVVMGATGAGKSKLSIDLATLFDAQIINSDKIQVYKGLDIVTNKITKEDQKGIPHHLLGTENPNSEFSASHFRDAALLAIDSITSSGQLPIIVGGSNSYIEKLIDDDDYQFRSRYDFYCLWVGVSMPVLDQYVAKRVDQMLENGMVDELRPFFNPKGDYSRGIRKAIGVPEFDQYFRYETLIRDEGMKQRVVEGAVKEMKENTRKLARKQLGKIERLRNVKRWKIQRVDATSVFRKNGEEAEEAWKKVVAEPSALMVASFLCDFQSSNVGGALRLPSPETAMATATC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2495 325 MobiDBLite consensus disorder prediction 1 24 - -
Mibi06g2495 325 Pfam IPP transferase 149 249 - -
Mibi06g2495 325 Pfam IPP transferase 71 144 - -
Mibi06g2495 325 Hamap tRNA dimethylallyltransferase [miaA]. 38 288 IPR018022 GO:0008033
Mibi06g2495 325 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 263 - -
Mibi06g2495 325 Gene3D - 35 299 IPR027417 -
Mibi06g2495 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 148 IPR027417 -
Mibi06g2495 325 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 35 298 IPR039657 -
Mibi06g2495 325 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2495 Mibi-ChrMibi06 45196860 45197837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2495 151 299 C2H2 Transcription Factor Family AT2G27760 31.429 9.15e-19 84.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1737 02 17815658 17816662 Mibi06g2495 06 45196860 45197837 CCT
Mibi06g2495 06 45196860 45197837 Mibi06g2495 06 45196860 45197837 ECH