Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2475 ATGAGGGAGGGGCTTAGATCTCACAAGCGATCGGAGGAACCGGAGACAGAGGAGGTTTCTGGAAGAGGAGTATTTCGGAAGGAAGGAAGCACAATAAAACAGGGTGCTCCTGATTCTAGTGGTGCGGATTCTTCGCATGAGAGAGAGCCTCTGGCATTGGAAGTTTCGAATAAAGAATTGGAGAAAGTAGCAAAAGATTGTGAGCTGGGCTGTGATACGGGGACTAGATCGAAAGTTGTGTTAGTCGAGAATGAGAACAATGGAAGGGTTTTAAATTGTGTGGATGAAATTCAAGGGAAGGTGAAGAAGGAAGGGGATTCAGACGATGAATTGCAAGCTGTTGGTAGAGTATTGCGCTCACAGTTGAAGAGGGCCGATGGTAAGAAACCTAATAACGAAGATAACACTGTTGTGGCGGTGAGGAGAAGTAGGGAGTCTGATGGGCCTAAGAAGGTTAAGGAAGGCAATGGCAAACGGAAGTTGAAACGAAAGCGTGGGAGGCCCCCTAAAACAGAGATGATAATGCAGGTTGGTGAGTTGCCCCGGAAGCCAGGGAGGCCACCCAAGGCTTGGCAAAATCATAAGCTTATCGCGGTGGGACGTAGTGAAAATAGAAAGCTGGGCTTTCAGAAAGGTCAAAAAGGCTTAACTATTAGAGGGGGTGCCAATAGAAGCCCAACTAAACAATGCTCAAAGAAGAGATTCTTTGGGAAGAAATCAGGGGCTGGTTTTTCTCCCATCAAAACTGAGAACAATGTAGGAGCGTCACCATTGAGATCAAATTCTTTAAATGTTCCTGTTGATAAGAAAAGGCAGAAGAGTGAAGCAAAGCAGTTGGTGAGGGATCAGATAATGGAACTGCTCATGGCTGCAGGCTGGACAGTTGATTATAGACCCAGGAATGGCAAAGATTACAAAGATGCAGTGTATGTTAGTTTAGACGGAAAGACCCACTGGTCAATTACCTTGGCCTACAATAGGCTGAAGAAGCATTATGAAGATGGTGATGGTGAGGGGAAGGTGTATGGACCAGGCTTTAAATTCACAGCTATACCCGAAGAAAAATTTAACACATTAACAAAGGTGATTAGCAAGCAAAGAAAAGGTGAAAAGGAATCTGTACAGAAAGGGTTAAATAATGGAGATGAAGTTAATAGAGCCAATAGAAAAGCGAAAAAAGAAAGACCAGGGTTCATTTCAAGCTTGGGTAAGTCAATGAAGGGGAAGAAGAGGAAACAGTCTTTTATCGAGGAGGATCATTCTGATGTAACGTTACTTAGCAAAATGTTGATTAAGGGTCGTAAGCGACAGAAAACTCAAAACAAGAAGCGATGTATTTTGTTGGTTCGTGATATCAGGAAAGAGATAGATTCAGAAGTTGATGGATATGTTCCTTACAATGGAAAACGTACTCTACTTGCCTGGATGATTGATATGGGAATGGTCTTGCAAGATGGGAAGGTACATTACATGGACCATGGAAGTAAAGGTGTGGCGTTGGAGGGTAGAGTAACTGGAGATGGCATTCTTTGTGGCTGCTGTAATGAAATTATTACAATTTCAGAATTTGAAGCCCATGCAGGAAGCAAACTTTCTGATCCATTTAGAAATATGTATACAGAGGGAGGAACTTCTCTCTTGCAGTGCCTGCTAGACTCGTGGAATAAACAAGATGAATCTGAACGTAAAGGTTTTTATTTTGTTGATGATGTTGGTGAGGACCCTAATGATGATACTTGTGGTGTCTGCGGAGATGGTGGGGACCTGATATGTTGTGATAGTTGCCCATCAACATTCCATCAAAGCTGCTTGAGTCTAGAATTAAATTTATCTTGTTTATTGTCCTGCCAGTTACATGAGAGGCTCAATATGCTTGTTGGGATCAAACATGAAATTGGAGATGGATTTTCCTGGTCTTTAATTCAGCGATCAGATGTTGGCTCAGATGCTTCTAAGATTAAATCTCAGATGGTTGAATGTAATTCCAAGCTAGCAGTTGCTGCATCGATAATGGATGAATGTTTCATGCCTTATATTGATCATAGAAGTGGGATTAATATCATCCACAGTATTCTTTATAATTGTGGCTCAAACCTCAACCGCCTGAACTATAGTGGATTTTTTACTGCCATTCTAGAGAGGGGAGATGAAATTATCTGCGCTGCATCTATTAGGATCCATGGGAACCAGCTAGCAGAGATGCCATTTATCGGGACCCGATCTATGTATAGGCGTCAAGGAATGTGCAGTCGCCTCCTAAGTTCCATTCAAGATGCACTCAGCTCTCTGAATGTAGGGTTATTGATAATACCCGCTGTAGCTGAAGTCAGAGAAACTTGGACTTCAGTATTTGCATTTGAGCCACTTGATTCGACAAGCAATAAAATGGTAAAGAGTTTGAATCTGTTGGTGTTCCCTCATGCAGATATGTTACAGAAAAAGATATCAAAGCCTTATTCTGCTGAAGTTGTCAATCCTGAACTTCCCAAGAATTTATGTCATGAGTCGAGCACTTCTGGAACTGAAGTGATCTTTTCTACTATGGAAAACCCATCAAGCCATTGCCCAGGCTCCGAGAAGGGAAGTCAATATCTCACAAAATCAGATGAGATAGTTACACACGAAAATGGCGCTGAGGATTCTCCAATCTTGTCCGAAAATATTCCTCACAGATCTGATATTGTGTCTTTTATGAGGGAATCCAAAGATCCTGAAATTGCATGTGATAATTCGAAAATCAATACCCCTTTGAAAGATAATGATGGGACTTTGCATCCTGAGTCTCAGGAATTCCAGTTGGCAGAATCTGTTTGTGATGGGCATAAAATTTCCAACAGTTGTGGACACATGACCGACCATGACTTTATTCAGAATCATTTGGTAGAATCTAAAGAACTGCCTTCTGAAGACTTGCCTGTTAATTGCATTAAATCATCCTCTGTGGTCAGTGAGCGAAATGCTGATGAAGTTTGTGCAACCAAGACATCCAATCTCCAGACCGACACCAATTCTGGAGATGGCCAATCTGTACTAGTGGCTTCAGGTTCTGCTGAGGATATTTTGAATGGTGTCAGTGTTAATAGTGAAGTATCTAGTATGTCTGAGTTCAATTTCCTTCCAGTTGATAAAAAGTTAGTTGTCATTAATAACCTTTGGACAGACCACTCTTCAGAGTTGCTAGATCCTGGTTTACAGGTGGATAGAGCTGCGCAGTGTAATGGTTCATCTCTTTGTAGCCCAAAAACACATGGCATGTCTCTTCACTGCGCATCTGCTGGTAGTACCGAGGTGATAGTTCTGTCGAACAAAGCCAGTTGA 3318 0.4201 MREGLRSHKRSEEPETEEVSGRGVFRKEGSTIKQGAPDSSGADSSHEREPLALEVSNKELEKVAKDCELGCDTGTRSKVVLVENENNGRVLNCVDEIQGKVKKEGDSDDELQAVGRVLRSQLKRADGKKPNNEDNTVVAVRRSRESDGPKKVKEGNGKRKLKRKRGRPPKTEMIMQVGELPRKPGRPPKAWQNHKLIAVGRSENRKLGFQKGQKGLTIRGGANRSPTKQCSKKRFFGKKSGAGFSPIKTENNVGASPLRSNSLNVPVDKKRQKSEAKQLVRDQIMELLMAAGWTVDYRPRNGKDYKDAVYVSLDGKTHWSITLAYNRLKKHYEDGDGEGKVYGPGFKFTAIPEEKFNTLTKVISKQRKGEKESVQKGLNNGDEVNRANRKAKKERPGFISSLGKSMKGKKRKQSFIEEDHSDVTLLSKMLIKGRKRQKTQNKKRCILLVRDIRKEIDSEVDGYVPYNGKRTLLAWMIDMGMVLQDGKVHYMDHGSKGVALEGRVTGDGILCGCCNEIITISEFEAHAGSKLSDPFRNMYTEGGTSLLQCLLDSWNKQDESERKGFYFVDDVGEDPNDDTCGVCGDGGDLICCDSCPSTFHQSCLSLELNLSCLLSCQLHERLNMLVGIKHEIGDGFSWSLIQRSDVGSDASKIKSQMVECNSKLAVAASIMDECFMPYIDHRSGINIIHSILYNCGSNLNRLNYSGFFTAILERGDEIICAASIRIHGNQLAEMPFIGTRSMYRRQGMCSRLLSSIQDALSSLNVGLLIIPAVAEVRETWTSVFAFEPLDSTSNKMVKSLNLLVFPHADMLQKKISKPYSAEVVNPELPKNLCHESSTSGTEVIFSTMENPSSHCPGSEKGSQYLTKSDEIVTHENGAEDSPILSENIPHRSDIVSFMRESKDPEIACDNSKINTPLKDNDGTLHPESQEFQLAESVCDGHKISNSCGHMTDHDFIQNHLVESKELPSEDLPVNCIKSSSVVSERNADEVCATKTSNLQTDTNSGDGQSVLVASGSAEDILNGVSVNSEVSSMSEFNFLPVDKKLVVINNLWTDHSSELLDPGLQVDRAAQCNGSSLCSPKTHGMSLHCASAGSTEVIVLSNKAS 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 121 172 - -
Mibi06g2475 1105 SUPERFAMILY FYVE/PHD zinc finger 567 607 IPR011011 -
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 1 50 - -
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 248 274 - -
Mibi06g2475 1105 Pfam Tify domain binding domain 502 551 IPR032308 -
Mibi06g2475 1105 SMART PHD_3 579 620 IPR001965 -
Mibi06g2475 1105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 569 661 IPR013083 -
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 1 24 - -
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 138 154 - -
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 248 265 - -
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 367 414 - -
Mibi06g2475 1105 PANTHER PHD FINGER PROTEIN 12 611 949 IPR042163 GO:0003714|GO:0045892
Mibi06g2475 1105 MobiDBLite consensus disorder prediction 367 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2475 Mibi-ChrMibi06 44986462 44992328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2475 160 855 PHD Transcription Factor Family AT5G36670 36.516 2.47e-156 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1706 02 17449792 17463024 Mibi06g2475 06 44986462 44992328 CCT
Mibi06g2475 06 44986462 44992328 Mibi06g2475 06 44986462 44992328 ECH