Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2458 ATGGATTACCCGTATGCGGTGAAAGAAGAGCACCTGGAAGCGACTACATCATATTCGGGAAGTGAGGCATCGGCAATTCCAGCTCCGCAGCCAATGGAGAGGCTTCACGAGCTGGGGCCACCACCATTTCTGACCAAGACATTCGACGTGGTGGACGACTCAGCTACCAATCATATAGTTTCTTGGAGCAGAGGAGGCGCTAGTTTTGTGGTTTGGGATCCACATGCCTTCTCTACGAGCCTCCTTCCCAGATACTTTAAGCACAACAATTTCTCTAGCTTTGTCAGGCAATTGAACACTTATGGATTTAGGAAAATTGATCCAGACAGATGGGAGTTTGCAAATGAAGGATTTCTGAGAGGCCACAAGTATCTTCTGAGGAACATAAGGAGAAGGAGGGCGCCTTCTAATTTGAGTCTTTCCCAGCAAGCACAACAGCTAGGTCATTGTGTTGAAGTAGGGAGTTTTGGACTGGACGAAGAAATTGACCGTTTGAGGCGAGACAAGCAGGTGTTAATGATGGAGCTGGTGAGGCTTAGGCAGCAGCAACAGAACACTAGATCATACCTCCAGGCAATGGAACAAAGGTTACAAGGCACGGAAAAAAAGCAGCAACAGATGATGGCTTTCTTGGCCAGAGCAATGAAAAATCCAACCTTTCTCCAGCAACTACTCCAACAGAAAGACAGAAGAAAGGAGCTTGAAGAAGCTATAACTAGGAAAAGAAGAAGGCCAATCGAGCATGGACCAAGTTGTATTGGGGAACCAAGCAGTGGTGGTGAAGCAATGAATGCTATAAAAGCTGAGCCTTCAGAATTTAGTAACTATGGCTTTGAAGTGTCGGAACTGGAAGTGTTAGCCAGGGAAATGCAGGGTTATGGTAGGGGTAGAAGAGAACAGGAGGCGGCAGAAGAACCACGGGAGAGGCTGGGAAAAGAACTTGATGAGGGTTTCTGGGAAGAATTATTCAGTGAACATTTTGAGGGTGAAATTGACATTCCAAGCTCTGAAGGTGAAGATGAAGACGTCAATGTCTTGGCCAATCGCTTAGGCTACTTGGGTTCGAGTCCTAAGCTGCAGCTGGTGATTGCGCAAGAAATCTGTGGTAGTGATAGCATTCATAATATCGATCTCAAGTTAAAAGCTGGACCTTTTAGTGCTTTTCTGATGCTCTATGACATTCTCTATGAACTGGCAAAGCAGCAGGTTCCAGGTGAAAGATTGGGAAATATATGGACTGATGGTTTATTGAAGAAGTTAATTATTGTGGATATTCATGTTGACCTTGTTCTGTATCGGATACTTGGGAGTTTGAAGGATTGGGAACAGGGAGGCTACCACAGTTGA 1347 0.4543 MDYPYAVKEEHLEATTSYSGSEASAIPAPQPMERLHELGPPPFLTKTFDVVDDSATNHIVSWSRGGASFVVWDPHAFSTSLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGHKYLLRNIRRRRAPSNLSLSQQAQQLGHCVEVGSFGLDEEIDRLRRDKQVLMMELVRLRQQQQNTRSYLQAMEQRLQGTEKKQQQMMAFLARAMKNPTFLQQLLQQKDRRKELEEAITRKRRRPIEHGPSCIGEPSSGGEAMNAIKAEPSEFSNYGFEVSELEVLAREMQGYGRGRREQEAAEEPRERLGKELDEGFWEELFSEHFEGEIDIPSSEGEDEDVNVLANRLGYLGSSPKLQLVIAQEICGSDSIHNIDLKLKAGPFSAFLMLYDILYELAKQQVPGERLGNIWTDGLLKKLIIVDIHVDLVLYRILGSLKDWEQGGYHS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2458 448 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g2458 448 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g2458 448 FunFam Heat shock transcription factor 1 36 133 - -
Mibi06g2458 448 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 255 IPR027725 -
Mibi06g2458 448 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Mibi06g2458 448 Coils Coil 162 182 - -
Mibi06g2458 448 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g2458 448 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g2458 448 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi06g2458 448 Gene3D - 36 133 IPR036388 -
Mibi06g2458 448 Coils Coil 224 244 - -
Mibi06g2458 448 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2458 Mibi-ChrMibi06 44834260 44837718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2458 21 356 HSF AT3G22830 53.243 2.16e-125 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi06g2458 HSF_DNA-bind 3.1e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1668 02 16982572 16983729 Mibi06g2458 06 44834260 44837718 CCT