Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2457 ATGTTTTCTGCAGCCATGTCCAATTCTGCTTCTTTGTCTGAAGAAGCCACTACTACTGTCTCTTTCTCTTCTGGTACTAAAGTCCAGAACTTCACTGCATCGTCAGGTCATATCATTTCAACCATCCCTACTCCTCAGCAGCCTCAAAAGATAAAGAAAAAAAGAAGCCCCCCTGGAAATCCAGATCCAGATGCAGAGGTGGTCGCGTTGTCCCCAAAGACCCTTATGACCACCAATAGGTATGTGTGTGAAATATGCAAGAAGGGTTTTCAGAGAGATCAGAACCTTCAGCTACACAGGAGGGGGCATAACCTTCCATGGAAGCTGAAACAAAGGAACAGTAAGGAGGTGAAAAAGAGAGTTTATGTTTGCCCAGAGGCTTCATGTGTTCACCATCATCCATCCAGAGCCCTGGGTGATCTCACTGGCATTAAGAAACACTATTGCAGAAAACATGGAGAGAAGAAGTGGAAATGTCACAAGTGCTCCAGAATCTACGCTGTTCAGTCTGATTGGAAAGCTCACTCCAAAACCTGTGGAACTCGAGAATACAGATGTGATTGTGGAAACCTTTTCTCCAGGAAGGACAGCTTCATAACACATAGGGCATTTTGTGATGCATTGGCGGCTGAAGAAAGTGCAAGACTCGGAGCCAATCAACTAGCTGCAGCTTGCACAAACCCAATGTTGATTCAATCTCTCTTCCCTTTCCAGAATCAGATGATGATGATGAAGATGATGATGAATCATCCCTGGGACTCATCATCATGTCAAGAAAACCCTAACCCTAGTTATAACCATGAAGAAGCAGTCCAAATGAAGACGGAAGTGGCTGAGTGTTTTCAGGTCCCATGCCCATCTTCTTCTCCGCCATATGTTCAAGTGATGATGCAGGAGCAGAATCAGAAGAACATGATGACGATGACAAACCCTTTCTTAAGAGCTCTCCCTCACGCCGCCACGTCGCCCCACCTGTCACCCACTGCTCTCCTCAGAAAGGCTGCAACTGTGGGCCCCACTGCCACCACAGGACCACAGTCAACCATAGCTCAGCCAATTAGCACGGGCGAGTATGGGCTCGTGACTCAGGCGGGTCATGACTGCATGGGAGGGCTCATGACTCGGGATCAAAACGACCCACTCACCAGGGACTTCCTCGGCCTCACCGCCTACGTTGACGGCGCAAGAGACGGCGGCTCCGTTGACGTTGGCTTGATGTTCACGGGTGGCGTAGAGTATGATCTCTTCAAGTCCCAACAAGATTTTGGATTCTTTGGCCCCTAG 1284 0.4852 MFSAAMSNSASLSEEATTTVSFSSGTKVQNFTASSGHIISTIPTPQQPQKIKKKRSPPGNPDPDAEVVALSPKTLMTTNRYVCEICKKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKRVYVCPEASCVHHHPSRALGDLTGIKKHYCRKHGEKKWKCHKCSRIYAVQSDWKAHSKTCGTREYRCDCGNLFSRKDSFITHRAFCDALAAEESARLGANQLAAACTNPMLIQSLFPFQNQMMMMKMMMNHPWDSSSCQENPNPSYNHEEAVQMKTEVAECFQVPCPSSSPPYVQVMMQEQNQKNMMTMTNPFLRALPHAATSPHLSPTALLRKAATVGPTATTGPQSTIAQPISTGEYGLVTQAGHDCMGGLMTRDQNDPLTRDFLGLTAYVDGARDGGSVDVGLMFTGGVEYDLFKSQQDFGFFGP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2457 427 MobiDBLite consensus disorder prediction 34 65 - -
Mibi06g2457 427 FunFam protein indeterminate-domain 5, chloroplastic-like 135 215 - -
Mibi06g2457 427 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 32 391 IPR031140 -
Mibi06g2457 427 FunFam protein indeterminate-domain 12-like 60 128 - -
Mibi06g2457 427 MobiDBLite consensus disorder prediction 34 53 - -
Mibi06g2457 427 Gene3D Classic Zinc Finger 60 131 - -
Mibi06g2457 427 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 103 IPR013087 -
Mibi06g2457 427 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Mibi06g2457 427 SUPERFAMILY beta-beta-alpha zinc fingers 79 104 IPR036236 -
Mibi06g2457 427 SMART c2h2final6 122 152 IPR013087 -
Mibi06g2457 427 SMART c2h2final6 81 103 IPR013087 -
Mibi06g2457 427 SMART c2h2final6 157 177 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2457 Mibi-ChrMibi06 44815772 44818339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2457 15 413 IDZ Gene Family AT4G02670 46.588 2.06e-112 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi06g2457 None None None