Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2443 ATGGACGCCGCCGGAAATATTCGTTCTCGTAGCTCTCAGTCTCCTTCTCCCTCTCACTCTGCTTCTGCCTCTGCTACCTCCTCCCTCCACAAGCGCAAGATGGCGTCTGACGATCACGCGCCTCCCTTCCCCCCTTCTTCCTTCTCCGCCGACACCCGCGACGGCGCTCTGACCTCCAACGACGACCTCGAGAGCATCTCCGCTCGCGGCGCCGATTCCGACTCCGACGATGACTCCGAGGACGCCGTCGTTGACGACGACGAGGAGGATTACGACAACGATTCCTCCATGCGTACCTTCACTGCTGCTAGGCTTGAAAACCCTCCCTCTGCTCCCCGCAATACCAAGCTCCAAAAGGATAATTCGACGGTCAAGATTGATAATTCGGATGGTGCAAAGGACGCTGCCTCCGCTGGGACTACTACTGCGGGAACCATCCCCTCCTCGACCTCACTTCCGGGCGTTATGGGTAAGGATGACTCGACGAAGATTTTTACTGATAATTTGCAGACGAGTGGGGCATACTGTGCTAGGGAAGAGTCTCTCAAGAAAGAGGAGGAAGCAGGGAGGCTCAGATTCGTATGCCTTTCAAATGATGGTGTCGATGACCATATGGTTTGGTTGATAGGATTGAAGAATATTTTTGCTAGGCAACTTCCCAATATGCCCAAGGAATACATTGTTCGACTCGTTATGGATAGGAGCCATAAGTCTGTGATGGTTATAAGACGTAATCTAGTTGTTGGAGGAATTACATATCGCCCATATGTAAACCAAAAGTTCGGTGAGATAGCCTTTTGTGCTATAACAGCTGATGAGCAAGTAAAAGGTTATGGCACCAGACTAATGAATTACTTGAAACTGTATGCTCGTGATGGCGATGGATTGACCCACTTTCTCACATATGCCGATAATAATGCTGTTGGCTATTTTATCAAGCAGGGCTTTACAAAAGAGATTCACTTGGAGAAAGATCGATGGCAAGGGTATATAAAGGATTATGATGGAGGGATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCATACACTGATTTATCAACTATGATTCGTCGTCAGAGGCAGGCTATTGATGAAAAGATAAGAGAGCTGTCAAACTGTCACATTGTTTATCCTGGATTTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAATCGATCAAAGTTGAGGACATTCCTGGATTGAGAGAGGCAGGATGGACCCCTGATCAGTGGGGTCATTCCCGATTTAGACATTTAATTGTTTCTGCAGACAACACTCCTAATCAAAAACTTTTGACTGGATTTATGCGATCACTTCTAAAGTCAATGCACGATCATGCTGATGCCTGGCCATTCAGGGAACCAGTTGATGCCCGTGATGTTCCTGATTATTATGACATCATCAAAGATCCAATGGATCTGAAGACAATGTCGAAGAGGGTGGAGTCTGAGCAATATTATGTTACATTTGAGATGTTCCTTGCAGATCTCAGAAGAATGTTCGCCAATGCACGAACCTATAACTCTCCAGATACCATTTATTACAAATGCGCTACCAGACTGGAAGCCCATTTTCAGAGCAAGGTTCATTCAGGCATGCCGTCTGGCGCCAAAATTCAGTAG 1629 0.4659 MDAAGNIRSRSSQSPSPSHSASASATSSLHKRKMASDDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEEDYDNDSSMRTFTAARLENPPSAPRNTKLQKDNSTVKIDNSDGAKDAASAGTTTAGTIPSSTSLPGVMGKDDSTKIFTDNLQTSGAYCAREESLKKEEEAGRLRFVCLSNDGVDDHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNLVVGGITYRPYVNQKFGEIAFCAITADEQVKGYGTRLMNYLKLYARDGDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYPGFDFQKKEAGIPKKSIKVEDIPGLREAGWTPDQWGHSRFRHLIVSADNTPNQKLLTGFMRSLLKSMHDHADAWPFREPVDARDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFLADLRRMFANARTYNSPDTIYYKCATRLEAHFQSKVHSGMPSGAKIQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2443 542 Pfam Acetyltransferase (GNAT) family 244 316 IPR000182 GO:0016747
Mibi06g2443 542 MobiDBLite consensus disorder prediction 134 156 - -
Mibi06g2443 542 MobiDBLite consensus disorder prediction 1 30 - -
Mibi06g2443 542 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 208 346 IPR016181 -
Mibi06g2443 542 SUPERFAMILY Bromodomain 420 532 IPR036427 GO:0005515
Mibi06g2443 542 ProSiteProfiles Bromodomain profile. 446 517 IPR001487 GO:0005515
Mibi06g2443 542 MobiDBLite consensus disorder prediction 51 66 - -
Mibi06g2443 542 PRINTS Bromodomain signature 463 479 IPR001487 GO:0005515
Mibi06g2443 542 PRINTS Bromodomain signature 449 462 IPR001487 GO:0005515
Mibi06g2443 542 PRINTS Bromodomain signature 498 517 IPR001487 GO:0005515
Mibi06g2443 542 MobiDBLite consensus disorder prediction 1 157 - -
Mibi06g2443 542 MobiDBLite consensus disorder prediction 111 125 - -
Mibi06g2443 542 SMART bromo_6 427 536 IPR001487 GO:0005515
Mibi06g2443 542 MobiDBLite consensus disorder prediction 74 93 - -
Mibi06g2443 542 Pfam Bromodomain 439 521 IPR001487 GO:0005515
Mibi06g2443 542 ProSitePatterns Bromodomain signature. 451 509 IPR018359 -
Mibi06g2443 542 CDD NAT_SF 247 292 - -
Mibi06g2443 542 Gene3D - 425 537 IPR036427 GO:0005515
Mibi06g2443 542 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 191 345 IPR000182 GO:0016747
Mibi06g2443 542 Gene3D - 187 351 - -
Mibi06g2443 542 CDD Bromo_gcn5_like 437 531 - -
Mibi06g2443 542 PANTHER GH11602P 17 538 IPR037800 GO:0004402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2443 Mibi-ChrMibi06 44670283 44675553 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mibi06g2443 Bromodomain 2.1e-22 No_clan