Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2441 ATGGCCAATAACCCTTCCGAGGCTCCAACAGACGACTTCTTCGAACAAATCCTTGGCCTCCCAACTTTCGCTTCCATTGACTCCGGCTTGGCCGGACCTGATGGTGGCTTGGCCGCTACGCACAAGTTGCTGCAACTCAACTCCGGCGATGCCACCGGCGGTGCTGGTTTTCATGCACCAGTGTACCAGTTGGGCCTCAGTTTAGACCAAGGAAAAGGAGCTACTACTTTTTTTAAACCTGAGGAGCCTTCGGGCAGTGGCAAGCGCTTTCGCGATGACCTCCTTGATGGTAGAACTAAGAATGTTTTTCATGGGCAGTCTATGCCATCGACCATTCCTACTGCTCCACAGCCACCAACAATGCGTCCGAGGGTGAGGGCTCGAAGAGGACAAGCCACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATAGCAGAGAGAATTAGGGCCTTGCAGGAATTGGTTCCTAGTGTTAATAAGACAGATAGAGCTGCCATGTTAGATGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTAAAGGTTTTGAGTATGAGCAGATTGGGTGGAGCCGGTGCAGTGGCACCACTGGTGACTGACATCCCATTATCATCAGTTGAGGAAGATGGAAGTGAAGGTGGAAGAAATCAAGCAATATGGGAGAAGTGGTCGAATGATGGCACAGAAAGACAAGTAGCTAAGCTTATGGAGGAAAATGTTGGAGCTGCCATGCAATTCCTTCAATCAAAGGCTCTCTGCATAATGCCGATCTCACTCGCGTCTGCGATCTACCACTCGCAGCCACCGGACACTTCAAGCATAGTGAAGTCTGAGACTAATCCTCCTCCATAG 864 0.4965 MANNPSEAPTDDFFEQILGLPTFASIDSGLAGPDGGLAATHKLLQLNSGDATGGAGFHAPVYQLGLSLDQGKGATTFFKPEEPSGSGKRFRDDLLDGRTKNVFHGQSMPSTIPTAPQPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEDGSEGGRNQAIWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHSQPPDTSSIVKSETNPPP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2441 287 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 89 266 - -
Mibi06g2441 287 SMART finulus 137 186 IPR011598 GO:0046983
Mibi06g2441 287 Gene3D - 126 188 IPR036638 GO:0046983
Mibi06g2441 287 MobiDBLite consensus disorder prediction 102 135 - -
Mibi06g2441 287 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 131 180 IPR011598 GO:0046983
Mibi06g2441 287 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 190 IPR036638 GO:0046983
Mibi06g2441 287 FunFam Basic helix-loop-helix transcription factor 126 188 - -
Mibi06g2441 287 Pfam Helix-loop-helix DNA-binding domain 136 180 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2441 Mibi-ChrMibi06 44654027 44657654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2441 57 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.814 4.76e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g2441 HLH 1e-07 No_clan