Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2440 ATGGAGAGTTCATCAGTATCAATGGGTGAGCTGAACCTGAAGGACACAGAGCTAAGGCTGGGATTGCCAGGCAGCGAGGAGCCAGGGAAACGTAGTTGCATTACTGTTGGAAGCAAAAGGAAATGTTCACCTGATGAGGAATCAACAGGCAAGAGTGGTGACGCTAAAACTGAACACAACCAGTCCGACAATATTAATGGCCCACCACCAGCAAAGGCACAAGTAGTGGGATGGCCACCAGTGAGAAGTTTCAGGAGGAATAGTGGGCAACAGAAGAAGGAGGAAGAGGGAGGGAGGTACGTGAAAGTGAGCATGGCAGGTACACCATACTTGAGGAAAATAGATATAAAGGTGTATAAGAGCTACCCGCAAGTGTTAAAGGCGTTGGAGAATATGTTCAAGTGCACATTTGGAGAATATTCAGAGAGGGAGGGATACAATGGATCTGAATATGTTCCAACATATGAGGACAAAGAGGGTGACTGGATGCTCGTTGGAGATGTTCCATGGAACATGTTCACATGTTCCTGCAAGAGGCTCCGAATCATCAAAGGATCCGAAGCTAAGGGTTTTGGTTGTCTATGA 585 0.4667 MESSSVSMGELNLKDTELRLGLPGSEEPGKRSCITVGSKRKCSPDEESTGKSGDAKTEHNQSDNINGPPPAKAQVVGWPPVRSFRRNSGQQKKEEEGGRYVKVSMAGTPYLRKIDIKVYKSYPQVLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKEGDWMLVGDVPWNMFTCSCKRLRIIKGSEAKGFGCL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2440 194 MobiDBLite consensus disorder prediction 1 77 - -
Mibi06g2440 194 SUPERFAMILY CAD & PB1 domains 91 182 - -
Mibi06g2440 194 ProSiteProfiles PB1 domain profile. 98 190 IPR000270 GO:0005515
Mibi06g2440 194 Gene3D - 92 193 - -
Mibi06g2440 194 FunFam Auxin-responsive protein 93 194 - -
Mibi06g2440 194 Pfam AUX/IAA family 35 191 IPR033389 -
Mibi06g2440 194 MobiDBLite consensus disorder prediction 40 58 - -
Mibi06g2440 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 189 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2440 Mibi-ChrMibi06 44637489 44638172 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2440 87 189 B3 DNA Binding Superfamily AT2G46530 37.500 1.12e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi06g2440 AUX_IAA 4.4e-54 CL0072