Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2439 ATGCCAGCTCATCATCATCAAAATAAAGATACACAAAATCTTCACTTCCTCTTAGAAAATCGGCTCCCCCACACAAAGGCTATTATTATCGCATCACATAGCAACAAAACACTGAATGCTTGGAGAGAGAGTGAGAGGCATAGAGAGAGAAAGTGTGGTAAAGTGATAAGATCAAAGAATTTTGGCATGGAAGTGATTGGGCTGAAGAAGGAGAAGATGGGGTTCGAGGAAACGGAACTTAGGCTTGGGCTCCCTGGAAATAAAGGAGTCTCTCCCAAAGATGCTGCTGAAGGAGGAGAAGCTGCCAGGAAGAGAGGTTTTTCTGAGACTGAGAATAATGGCACTGTGGATTTGATGCTCAATCTCTCTTCTTCCAAAGATTCTGACCACTGCTCCTCTGATGACAAACCCAAGGAGAAGACCCTTCTTCCTGCCGATCCCGCCAAGCCTCCTGCCAAGGCACAAGTTGTGGGATGGCCCCCGGTGAGATCATTCCGGAAGAACATGTTAGCCCAAAAGAAGAACGGAGAAGAAAGTGATCAGAAAAGCAGCCCTAATGGAAGCTTCGTGAAAGTGAGCATGGACGGAGCTCCTTATCTTCGCAAAGTGGACCTCAAGCTGTACAAGAGCTACCAAGACCTATCTGATGCCTTAGGCAACATGTTCAGCTCCTTCACCATTGGGAACTGTGGATCCCAAGGACTGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTGTTGAACAGCTCCGACTATGTCCCGACCTATGAGGACAAGGATGGCGACTGGATGCTTGTCGGTGACGTCCCTTGGGAGATGTTCGTTGAATCCTGCAAGCGCTTGCGTATTATGAAAGGAAAGGAGGCTATTGGGCTTGCACCTAGGGCCATGGAGAAAGTCAAGAACCGAAGCTAG 918 0.4771 MPAHHHQNKDTQNLHFLLENRLPHTKAIIIASHSNKTLNAWRESERHRERKCGKVIRSKNFGMEVIGLKKEKMGFEETELRLGLPGNKGVSPKDAAEGGEAARKRGFSETENNGTVDLMLNLSSSKDSDHCSSDDKPKEKTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAQKKNGEESDQKSSPNGSFVKVSMDGAPYLRKVDLKLYKSYQDLSDALGNMFSSFTIGNCGSQGLKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAMEKVKNRS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2439 305 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 73 292 IPR003311 GO:0005634|GO:0006355
Mibi06g2439 305 ProSiteProfiles PB1 domain profile. 187 287 IPR000270 GO:0005515
Mibi06g2439 305 Pfam AUX/IAA family 77 296 IPR033389 -
Mibi06g2439 305 Gene3D - 181 298 - -
Mibi06g2439 305 MobiDBLite consensus disorder prediction 84 156 - -
Mibi06g2439 305 FunFam Auxin-responsive protein 182 297 - -
Mibi06g2439 305 MobiDBLite consensus disorder prediction 108 127 - -
Mibi06g2439 305 SUPERFAMILY CAD & PB1 domains 182 286 - -
Mibi06g2439 305 MobiDBLite consensus disorder prediction 128 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2439 Mibi-ChrMibi06 44626645 44629734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2439 177 295 B3 DNA Binding Superfamily AT4G23980 31.092 5.94e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi06g2439 AUX_IAA 5.9e-84 CL0072