Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2429 ATGGTAGAGAGCCCTTCTCTTCCTGCGAAAATGTCGGAATATTTTGATGAGACGAAAGGCATATTTGGCAATTTTCCTTTAGTTCCCCGACAAAGCGGGAACCAGACGACAGATGTCGCACCTGGACAGTCGAAGAAGAGGACGTTCAAGAAGTTTAGTTTTAGAGGAGTTGATCTCGATGCTCTCCTCGACATGTCTACTGATGACCTTGTCAAACTCTTCCAAGCTCGGGCGCGCAGAAGGTTCCACCACGGTTTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTGCGTAAAGCGAAGCGGGAGGCCCCACCTGGTGAAAAGCCGGAACCAGTAAGGACTTACCTCCGCAATATGATCATTGTACCTGATATGATTGAAAGCATTATTGGTGTTTACAATGGCAAGACCTTTAATCAAGTAGAAATCAAGCCAGAAATGACTGCTCACTATCTAGCTGAGTTCTCAATCTCTTATAAGCCGGTTAAGCATGGTAGGCCCGGTATTGGTGCTACTCACTCTTCTAGGTTCATTCCCCTCAAGTGA 549 0.4663 MVESPSLPAKMSEYFDETKGIFGNFPLVPRQSGNQTTDVAPGQSKKRTFKKFSFRGVDLDALLDMSTDDLVKLFQARARRRFHHGLKRKPMALIKKLRKAKREAPPGEKPEPVRTYLRNMIIVPDMIESIIGVYNGKTFNQVEIKPEMTAHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2429 182 FunFam 40S ribosomal protein S15 39 182 - -
Mibi06g2429 182 Gene3D 30s Ribosomal Protein S19; Chain A 40 182 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 Pfam Ribosomal protein S19 81 165 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 PRINTS Ribosomal protein S19 family signature 135 147 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 PRINTS Ribosomal protein S19 family signature 147 162 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 PRINTS Ribosomal protein S19 family signature 115 134 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 TIGRFAM uS19_arch: ribosomal protein uS19 49 182 IPR005713 GO:0003735|GO:0006412|GO:0015935
Mibi06g2429 182 Hamap 30S ribosomal protein S19 [rpsS]. 75 171 IPR002222 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 SUPERFAMILY Ribosomal protein S19 86 166 IPR023575 GO:0003735|GO:0005840|GO:0006412
Mibi06g2429 182 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 42 182 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2429 Mibi-ChrMibi06 44555497 44557264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2429 40 182 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 85.315 1.97e-85 246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g2429 06 44555497 44557264 Mibi06g2429 06 44555497 44557264 ECH