Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2418 ATGTCCTCAGAAATGGGCGATTTTGGAGGGCTTTTGGACAACGCCATTTCCCCAAACCATTGGATCTTGCGAAGGCGACGTTGTTTGAAGAAACATGTCTATGCAGCCGAGCTACATAGTGAGAAAATGGTAACGGAGCTCTCATATCCTCTATTACCTGAAATTTTCTTGAATTTGGTTCATAAGGGTATTTCGGAAAACATTGTTGTTGGTTCTCAAATTTTGGTTGGTGATTCCAAACAAGTTTGGATTGATGGAGAGGTACTGAAAATCAATGGAGAGGAAGTTGAGGATGGAGGAATGGCTTATCAAGTTCCTCTTACATTTCTAGTGTTCTACACGTTACCAGCCATGGTTCCAGAGGTGGCTTTCCTGATGCCCATCAATGGTATCAAAGCTGCTTCATTGACAGCTTCGCAAAAGGTTGTTTCCAGTCTGTCAAAATTACATCCCAAGGATGCAGATGCTCCTGCCGGTGGAGTTGATGATATGACCAATCTTGCTTACTTGCATGAGCCAGCAGTGCTCCATAATTTAGCAACTAGATACAAGATGAATGAGATATATTGCCATTTATACTACCTATTATTTGCTTCAATTAGGGCAATGGTCAATGAGGAGAAAAGCAACGCTATTCTTGTTAGTGGTGAGAGTGGAGCTGGTAAGACAGAAACCACCAAAATGATCATGCGTTATCTGGCATATTTGGGTGGACATGCTGCTGCTGAAGGAAGTAGTGTTGAGCAACAAATTTTAGAATCAAACCCTGTTCTTGAAGCATTTGGCAATGCAAAAACTGTCAGAAATAACAATTCCAGTTGCTATGAATTAGATGGTGTTGATGCTGCCCAGGAGTACTCGAGCACGAGGAGAGCTATGGATGATGCAATTTTCAGGGTTGTGGCTGCTATTCTTCATCTTGGAAACATTAAGTTTGAGAAATCAGAAGAAGATTCATCAGTTTTGGCAGATGAAGAATCAAAGTCCCATCTTGAAATGACAGCAGGACTTCTCAAATGCGTTCCAAGTGCTTTGAAAGATGCACTGTGTAAGCGTATGATGATTACCCCAGAGGAAGTCATTAAGAAAAGTCTTGATCCTCTAGCTGCGACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTTGGTTATTTGACTGGTTAGTCCAAAAAATTAATGTCGCTATTGGGCAGGACCCTGGCTCAAAATTTTTGAGCAGTTTTGTATTAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGGTATGAGATGGAGCAAGAGGAATATAAAAGGGAAGGGATTGATTGGAGCTACTTAGAATTTGTAGATAATCAAGATATATTGGATCTTATCGAAAAGGTTTCCACACATACTTCGGACTCAATATTTAAACCAGGTGGAATCATTGCTCTGCTTGATGAAGCATGTATGTTTCCAAGGTCAACTCATGAAACATTTTCTCAAAAGCTTTATCAGACCTTCAAAAATAACAAGCGCTTCATCAAGCCAAAATTATCTCAATCAGATTTTACCATCATTCATTATGCAGGGGAGGTTCAGTATCAGTCTGATCAGTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAGCATCATGACATGTTGAGTTCTTCCAAATGTTTTTTTGTAGCAAGCCTTTTCCCCTCACTTTCTGAGGAGACAGCCAAATCTGCTAAATTTGCTTCTATCGGTGCTCGCTTTAAGCTACAATTACAACAACTGATGGATACGCTAAAATCCACAGAACCCTACTATATTAGATGTGTGAAGCCGAATGATGAACTAAAACCTGGTGTGTTTGATAATATGAATGTCATCCAACAACTTCGCTCTGGTGGTGTTTTTGAAGCAGTAAGAATTAAATGTGCTGGATTTCCAACACACAGAACCTTTCGTGATTTTTTGACTCGAGTTGCTCTACTTGCTCCTGAGATTGTGAAAGAGAACTCTGATGAGAAAGATTCATGTATAAAGATTTTGGAGAAGATTGGCCTTACAGGTTATCAGATAGGGGAATCACAGATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGATGCTCGAAGGGCACTCCTCCTCAGCAGCTCTGCTTTTGTTATCCAGAAACGGATCAAAACCCATCTGGCTCAGAAGAGATATGTCACATTGCAAAAGACTTCTGTCTGTGTGCAATCTTTTTGTAGAGGGGTAATGGCTCGGAGATCATATTATCACATGAAGAGAAATGCAGCTGCTGTCAGAATTCAAAGGAATGTTCGTGGAAAACTAGCCAGGAAAAAGTACAACCAAATATATACTTATGCCATTGTATTGCAGACAGGCTTCCGGGCTATGGCAGCTCATGATGAATTGAGATATAGAATGGAAACTAGTGCATCGATTAAACTTCAGTTTGATCAATTTTCTAATTGTGCTTTAAATAAGGTGTTTGCTGTCATGGAATGCCAGGTTGTGGAGAAAGCAGTTGAAATCGATAGCCAGATTGTGGAGAAAGCAGTGGTAAATAAAAGCCCTTATGTGGGAGAATCCACAAGTCGGTGTAAAGATACTGAAAGCATTTTTGCGATCAAAAAATACTCAAGTTCTCCCCAAGACTCTGAAAAGATTGAGGCTCTTACTTCAGAAGTCATAAATTTAAAGGTTATGTTGCATGCAGAAAAACAAAGAGCTGATGATTATGAAAGGAAATATGAGGAAGCCCAAGAATCAAGAGAGGAGTTACGCAAAAAGCTAGCAGAGACGGAAAAAAGAGTGTACCAACTTCAAGACTCATGGAACTGGATGATATCTTTCATGTCAAGCCAAGTTGCGGATCTGACATTGACACTAAGTACTTCATCAAGATTAAGTTCAACTTTCCGGCCTATTGCTAGAGTTGATGTTGCTTCCAGCAACTCTGATACTTCATCCACAGATTCTGATTTCACAGCTTCAGCTCCTGCTTCAAATACAACCGATCAGTTTAACTCTCAGCCTTGTTCTATTCAGCTAGTTTTTCAGGGTGTCACTGCAGCGGATGGTTCAGGATCTGAAGGTGAAAAGGTGGGGCCATTTGACGATTGCTTCTAG 3099 0.4027 MSSEMGDFGGLLDNAISPNHWILRRRRCLKKHVYAAELHSEKMVTELSYPLLPEIFLNLVHKGISENIVVGSQILVGDSKQVWIDGEVLKINGEEVEDGGMAYQVPLTFLVFYTLPAMVPEVAFLMPINGIKAASLTASQKVVSSLSKLHPKDADAPAGGVDDMTNLAYLHEPAVLHNLATRYKMNEIYCHLYYLLFASIRAMVNEEKSNAILVSGESGAGKTETTKMIMRYLAYLGGHAAAEGSSVEQQILESNPVLEAFGNAKTVRNNNSSCYELDGVDAAQEYSSTRRAMDDAIFRVVAAILHLGNIKFEKSEEDSSVLADEESKSHLEMTAGLLKCVPSALKDALCKRMMITPEEVIKKSLDPLAATVSRDGLAKTLYSWLFDWLVQKINVAIGQDPGSKFLSSFVLITQMKSCSNTSTRYEMEQEEYKREGIDWSYLEFVDNQDILDLIEKVSTHTSDSIFKPGGIIALLDEACMFPRSTHETFSQKLYQTFKNNKRFIKPKLSQSDFTIIHYAGEVQYQSDQFLDKNKDYVVPEHHDMLSSSKCFFVASLFPSLSEETAKSAKFASIGARFKLQLQQLMDTLKSTEPYYIRCVKPNDELKPGVFDNMNVIQQLRSGGVFEAVRIKCAGFPTHRTFRDFLTRVALLAPEIVKENSDEKDSCIKILEKIGLTGYQIGESQIFLRAGQMAELDARRALLLSSSAFVIQKRIKTHLAQKRYVTLQKTSVCVQSFCRGVMARRSYYHMKRNAAAVRIQRNVRGKLARKKYNQIYTYAIVLQTGFRAMAAHDELRYRMETSASIKLQFDQFSNCALNKVFAVMECQVVEKAVEIDSQIVEKAVVNKSPYVGESTSRCKDTESIFAIKKYSSSPQDSEKIEALTSEVINLKVMLHAEKQRADDYERKYEEAQESREELRKKLAETEKRVYQLQDSWNWMISFMSSQVADLTLTLSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTASAPASNTTDQFNSQPCSIQLVFQGVTAADGSGSEGEKVGPFDDCF 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2418 1032 Coils Coil 893 934 - -
Mibi06g2418 1032 ProSiteProfiles IQ motif profile. 751 777 IPR000048 GO:0005515
Mibi06g2418 1032 ProSiteProfiles IQ motif profile. 726 755 IPR000048 GO:0005515
Mibi06g2418 1032 Gene3D Kinesin motor domain 74 194 IPR036961 -
Mibi06g2418 1032 Gene3D Kinesin motor domain 592 634 IPR036961 -
Mibi06g2418 1032 Pfam IQ calmodulin-binding motif 731 746 IPR000048 GO:0005515
Mibi06g2418 1032 Pfam IQ calmodulin-binding motif 753 771 IPR000048 GO:0005515
Mibi06g2418 1032 Pfam Myosin head (motor domain) 425 688 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2418 1032 Pfam Myosin head (motor domain) 188 274 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2418 1032 Gene3D Kinesin motor domain 195 276 IPR036961 -
Mibi06g2418 1032 Gene3D - 425 591 - -
Mibi06g2418 1032 ProSiteProfiles Myosin motor domain profile. 1 700 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2418 1032 Gene3D - 753 804 - -
Mibi06g2418 1032 Gene3D - 703 752 - -
Mibi06g2418 1032 Gene3D - 635 701 - -
Mibi06g2418 1032 SMART iq_5 750 772 IPR000048 GO:0005515
Mibi06g2418 1032 SMART iq_5 702 724 IPR000048 GO:0005515
Mibi06g2418 1032 SMART iq_5 725 747 IPR000048 GO:0005515
Mibi06g2418 1032 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 752 IPR027417 -
Mibi06g2418 1032 Gene3D Myosin VI head, motor domain, U50 subdomain 293 419 - -
Mibi06g2418 1032 MobiDBLite consensus disorder prediction 972 999 - -
Mibi06g2418 1032 PANTHER MYOSIN 272 966 - -
Mibi06g2418 1032 SMART MYSc_2a 153 701 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2418 1032 PRINTS Myosin heavy chain signature 256 283 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi06g2418 1032 PRINTS Myosin heavy chain signature 209 234 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2418 Mibi-ChrMibi06 44427660 44448004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2418 261 807 Myosins gene family AT1G54560 57.539 0.0 686