Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2417 ATGGAAGGGAACTATGTGATGAGAAGAGATAATCAGAAGAAGCATAGTAATGGAGAAGAAAAGGTGAGGATGGAGGAGAATTCATGGGGAAGCTCATGGCCAGCAAGAAATTACGCGTGTAGCTTCTGCAAGAGAGAGTTCAGGTCAGCTCAAGGTTTGGGTGGCCACATGAACGTGCACAGGAGAGATAGGGCTAGATTGAGATCAGGCATAATACCACCCTTATGGCTTCATAATAACTCTGATTCTCCTTATAAACCTAACTCTATTACTTCCTCCTCATCAAGGCCACCATCTTCTAATAACCCAACTTCTCTCACTTTGTCTTCTACTGCGAGTGATGATGACAAGGAACCACCAATGCTAGTCACGTATTCTTCTAAGCTCCCTCTTCTTCAAAGCAGAGAAATGATCATGAATGGTGAGAGCTCGAGGAGTGGATTTAGATCAGTGAAGGAGGAATTGTTGAAGGAGAAAGGGCTTAAGGGTTTGGAGGATATTAAGGATAACAATAGTAATATCACGTCGTTGGAGCTGGGTTTAGGGTTGCTTCAACACCCAAAGGAGCACATAGATTTGGAGCTTCGACTCGGCCATTAA 600 0.4383 MEGNYVMRRDNQKKHSNGEEKVRMEENSWGSSWPARNYACSFCKREFRSAQGLGGHMNVHRRDRARLRSGIIPPLWLHNNSDSPYKPNSITSSSSRPPSSNNPTSLTLSSTASDDDKEPPMLVTYSSKLPLLQSREMIMNGESSRSGFRSVKEELLKEKGLKGLEDIKDNNSNITSLELGLGLLQHPKEHIDLELRLGH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2417 199 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Mibi06g2417 199 MobiDBLite consensus disorder prediction 81 114 - -
Mibi06g2417 199 MobiDBLite consensus disorder prediction 76 122 - -
Mibi06g2417 199 SUPERFAMILY beta-beta-alpha zinc fingers 35 64 IPR036236 -
Mibi06g2417 199 Pfam C2H2-type zinc finger 38 62 - -
Mibi06g2417 199 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Mibi06g2417 199 MobiDBLite consensus disorder prediction 1 31 - -
Mibi06g2417 199 PANTHER OS07G0101800 PROTEIN 12 199 - -
Mibi06g2417 199 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2417 Mibi-ChrMibi06 44420362 44420961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2417 30 198 C2H2 Transcription Factor Family AT3G23130 41.379 4.73e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi06g2417 zf-C2H2_6 4.4e-06 CL0361