Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2416 ATGGAATTCATCAGAAATCCAGAAGAGTACAGAAGCAGCTGGAGCGAGGAAAGCGATGATGATAGGACAGGAATAGGAAGATCGTACGAGTGCGTGTTTTGCAAGAGAGGCTTCACTACGGCACAAGCTTTGGGAGGACACATGAATATACACAGAAAGGATAGAGCCAATAATAAAAGCAAGCACACTACCACTGTTGTTGCTCCTTCTCCTTCCTCTACCAAACTTGTCGATCTCGGTCCTACTCCTGGAAATTACTATTTAACACCTACTCCCGAGGTACATAGCAATAATTACGACCCTCCATTTTATCACCATCCCACTACAATCAGATCATCTTCGCATCAATATCATGTACAGTTCGGAGGAGATTGGAGGAGGACCACAAGCTTGAGCTTGTATACCAATCCATTCTGCCTGCCTGACAAGATACAAAGCGATGTATCAGAGGATGGGCTCGATTTGGAGCTTCGACTCGGTTATCAACCATAA 492 0.4472 MEFIRNPEEYRSSWSEESDDDRTGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNKSKHTTTVVAPSPSSTKLVDLGPTPGNYYLTPTPEVHSNNYDPPFYHHPTTIRSSSHQYHVQFGGDWRRTTSLSLYTNPFCLPDKIQSDVSEDGLDLELRLGYQP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2416 163 MobiDBLite consensus disorder prediction 61 79 - -
Mibi06g2416 163 SUPERFAMILY beta-beta-alpha zinc fingers 27 55 IPR036236 -
Mibi06g2416 163 MobiDBLite consensus disorder prediction 58 79 - -
Mibi06g2416 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 56 IPR013087 -
Mibi06g2416 163 PANTHER OS07G0101800 PROTEIN 8 162 - -
Mibi06g2416 163 ProSitePatterns Zinc finger C2H2 type domain signature. 31 51 IPR013087 -
Mibi06g2416 163 MobiDBLite consensus disorder prediction 1 22 - -
Mibi06g2416 163 Gene3D Classic Zinc Finger 14 78 - -
Mibi06g2416 163 Pfam C2H2-type zinc finger 29 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2416 Mibi-ChrMibi06 44414068 44414559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2416 27 163 C2H2 Transcription Factor Family AT4G17810 36.129 3.99e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi06g2416 zf-C2H2_6 1.3e-05 CL0361