Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2415 ATGGCTTCTTCTGGGTCTCCCTGCGGTGCTTGCAAGTTCCTCAGGAGAAAGTGCGCCGCCGATTGCATATTTGCTCCCTACTTCTGCTCCGACCAAGGCTCTTCCAGATTTGCCGCCATTCATAAGGTTTTCGGCGCCAGCAATGTTTCTAAATTGCTCCTTCATATCCCTGCTCGTGATCGCTGTGAGGCCGTCGTCACTATTGCTTATGAGGCCCAGGCTCGCATCAGAGACCCTGTTTATGGTTGTGTCGCTCACATTTTTGCCCTCCAACAACAGGTGGCGTGCTTGCAGGCACAACTGATGCAGGTGAGGGCTCAAGTGGCGCAGAAGAACCTCATGGAAAGCAGGAACCTTGAAAACCAGTCGGGAGGGAATTATCATCGTCATAATAATGTTGTGGGAGGTCATCACGCCATGAATAATGCATACAACAACAACATGATCCCTGTTTCTCCTCAGAGCTCTCTTGAGTCGGTTGACCATAACGATGGTGATGGAATAGTCAACGTGCAAGATATGCGAAGTAGAGAGGAGTTTCCGTTCCCTAAAAGCAGTAGAAGATCTTATAATTACCATGATTTGGGTGAGCTCCATCAGCTTGCACTCAGGATGATGAGGAACTAG 627 0.4912 MASSGSPCGACKFLRRKCAADCIFAPYFCSDQGSSRFAAIHKVFGASNVSKLLLHIPARDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVRAQVAQKNLMESRNLENQSGGNYHRHNNVVGGHHAMNNAYNNNMIPVSPQSSLESVDHNDGDGIVNVQDMRSREEFPFPKSSRRSYNYHDLGELHQLALRMMRN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2415 208 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Mibi06g2415 208 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 163 - -
Mibi06g2415 208 Coils Coil 87 107 - -
Mibi06g2415 208 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2415 Mibi-ChrMibi06 44398045 44398809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2415 1 208 AS2 family AT2G42430 52.066 5.95e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi06g2415 LOB 3.5e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1625 02 16447578 16456407 Mibi06g2415 06 44398045 44398809 CCT