Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2407 ATGGAGGAAGGGATGAGTAGCAGTGGTGTGAATAATAATACTAATAATGGTAATGGTGGGGAGGTGAGATACAGGGGGATCCGGAGGAGGCCATGGGGCAAGTTTGCTGCAGAGATCCGAGACCCGACCCGGAAAGGGACCCGCATTTGGCTGGGAACATTCGACACGGCGGAGGAGGCTGCCAGAGCATACGACGCCGCCGCCTTCCATTTCAGGGGCCACCGTGCCATCCTTAATTTCCCCAACGACCACCACTCTCTTCATCCTCCCTCTTCTTCTCTCCCTCTCCCTCTTCCCTCTTCTTCTTCTTCTTCCACTATTAATATTCCTCAGCCGCACGAGGCCGTGGAGTTTGAATACCTGGACAACAACTTGCTGGACGAACTCCTACAACAACAGGTTTACACCCGTCCTAGCTTCCCCATGTGA 429 0.5385 MEEGMSSSGVNNNTNNGNGGEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNDHHSLHPPSSSLPLPLPSSSSSSTINIPQPHEAVEFEYLDNNLLDELLQQQVYTRPSFPM 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2407 142 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mibi06g2407 142 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Mibi06g2407 142 MobiDBLite consensus disorder prediction 1 24 - -
Mibi06g2407 142 FunFam Ethylene-responsive transcription factor 2 22 82 - -
Mibi06g2407 142 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Mibi06g2407 142 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Mibi06g2407 142 MobiDBLite consensus disorder prediction 88 107 - -
Mibi06g2407 142 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Mibi06g2407 142 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Mibi06g2407 142 Pfam AP2 domain 23 74 IPR001471 GO:0003700|GO:0006355
Mibi06g2407 142 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Mibi06g2407 142 MobiDBLite consensus disorder prediction 1 20 - -
Mibi06g2407 142 PANTHER DNA-BINDING DOMAIN 19 127 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2407 Mibi-ChrMibi06 44302782 44303210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2407 18 137 AP2-EREBP Transcription Factor Family AT3G23230 55.556 2.45e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g2407 AP2 2.7e-15 CL0081