Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2406 ATGGATTTGCTAGACTTCCAAAACCAGGAGCTATACTCTGCAAATTCCAATTGCTCTGTTTTAGAAGAGACATTCAGCTGGGAAGAATTCTTCTCCTTCAACTCCGAGGACTACTCATCCTCCCAATCCAATTCTGGGGGAGGGGGATTCGAATGTCAAGAAGTGTCGTCCCAAGTAGTAACGCAAGTGACGATGGCAAAAAACGATGCTATCAACAACGCATACACATACACATACACATCATCATCAGCAACAGTAGGAGAACATGACGATGATGATGATGATGATAAGGATAAGAAGAAGAAGAAGGAGAAGAGGCCGTACAGGGGAGTGAGGAGGAGGCCATGGGGGAAATTCGCGGCGGAGATAAGGGACTCAACGAGGAATGGGGTGAGAGTATGGATCGGAACATTCGACACGGCGGAGGCGGCCGCCTTGGCCTACGACCAGGCAGCTTTCTGCACCAAAGGCTCCATGGCGGTGCTTAATTTTCCAGAGGAAGTGGTGAGAGAGTCTCTAGAGAGAATGGGGAGTAAGCCATGGGAGGAAGGTTCGTCTCCTGTCTTGGCCCTCAAGAGAAAGCACACCTTAAGGCCAAGAAGGTCCTCGTCTTCTACTTCTTCTTCCTCAAACACTTCTAAGAGGCCCAGGAAGAGTAATAGTAACAGTAGCTCATCCATGTCGTCCATGGTTACCACACAAGCTTCCAACAATAGTAACGTGCTTGTTTTGGAGGATTTGGGGGCTGATTATTTGGACCATCTCTTGACCTTGACATCCTCCTCTCACTTTCTTTCTTAG 801 0.4819 MDLLDFQNQELYSANSNCSVLEETFSWEEFFSFNSEDYSSSQSNSGGGGFECQEVSSQVVTQVTMAKNDAINNAYTYTYTSSSATVGEHDDDDDDDKDKKKKKEKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAAFCTKGSMAVLNFPEEVVRESLERMGSKPWEEGSSPVLALKRKHTLRPRRSSSSTSSSSNTSKRPRKSNSNSSSSMSSMVTTQASNNSNVLVLEDLGADYLDHLLTLTSSSHFLS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2406 266 MobiDBLite consensus disorder prediction 201 232 - -
Mibi06g2406 266 MobiDBLite consensus disorder prediction 84 110 - -
Mibi06g2406 266 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Mibi06g2406 266 PRINTS Ethylene responsive element binding protein signature 108 119 IPR001471 GO:0003700|GO:0006355
Mibi06g2406 266 ProSiteProfiles AP2/ERF domain profile. 107 165 IPR001471 GO:0003700|GO:0006355
Mibi06g2406 266 PANTHER DNA-BINDING DOMAIN 67 257 IPR044808 GO:0003700|GO:0009873
Mibi06g2406 266 CDD AP2 108 166 IPR001471 GO:0003700|GO:0006355
Mibi06g2406 266 Pfam AP2 domain 108 156 IPR001471 GO:0003700|GO:0006355
Mibi06g2406 266 SMART rav1_2 107 171 IPR001471 GO:0003700|GO:0006355
Mibi06g2406 266 SUPERFAMILY DNA-binding domain 108 166 IPR016177 GO:0003677
Mibi06g2406 266 MobiDBLite consensus disorder prediction 176 232 - -
Mibi06g2406 266 FunFam Ethylene-responsive transcription factor 2 106 166 - -
Mibi06g2406 266 Gene3D AP2/ERF domain 107 167 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2406 Mibi-ChrMibi06 44281476 44282276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2406 77 256 AP2-EREBP Transcription Factor Family AT2G31230 55.026 3.63e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g2406 AP2 1.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1602 02 16052840 16053532 Mibi06g2406 06 44281476 44282276 CCT
Mibi06g2406 06 44281476 44282276 Mibi06g2406 06 44281476 44282276 ECH