Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2399 ATGGGGAGAGCTCCGTGCTGTGAGAAAATGGGACTGAAAAAAGGGCCTTGGTCTTCTGAAGAAGATCACTTGCTCATCACTTACATCCAATCTCATGGTCACTCCAATTGGCGAGCCCTTCCCAAACAAGCTGGGCTGTTAAGGTGTGGCAAGAGTTGCAGACTGCGATGGACCAACTATTTGAGGCCTGATATCAAACGCGGTAACTTCACCCCTGAAGAAGAGCAAACCATCTTCCACTTGCACCATCTCTTGGGAAACAGGTGGTCAGCAATTGCAGCGAGATTACCGGGACGCACAGACAATGAGATAAAAAATGTGTGGCATACCCACTTAAAGAAGAAGCTCCCCCATAACCAACAAAACATCCCCACCAATCCCAACTCTAAACACAAAAAACAAAACCCCGTGACTTCTTCCGCAGTGATCAAAACCCACGACGACCACCACCGTAATGTTCCACCGTCTCCGCCACAATGTTCTATCAGTATCAGTGATACTTCCACCCTCACTGACACTGACAATATGGAACCTAACAGTAACAACATGTTCACAAATGATGTCGACACGCTGACACATAATAATAATATAGAGACTTTGGACGATGATTTCTGGTCGGAAGTCTTGTCGGCTGATAATTCTGCCGAAAGTTGCCAACTTGAAGGCGTGGCTGCTTACGACACTGCTGATGATATGCACTTCCAATTCCCATTATCTCCACTCACTACGGGAACGGGTGAAGCAAGTACTATTTGCGATGCGTTTAACATGAACTTTTGGGGCGACCATTATGTTTTAACGGGGTTATCACCACAGTTATGA 822 0.4623 MGRAPCCEKMGLKKGPWSSEEDHLLITYIQSHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTPEEEQTIFHLHHLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKKLPHNQQNIPTNPNSKHKKQNPVTSSAVIKTHDDHHRNVPPSPPQCSISISDTSTLTDTDNMEPNSNNMFTNDVDTLTHNNNIETLDDDFWSEVLSADNSAESCQLEGVAAYDTADDMHFQFPLSPLTTGTGEASTICDAFNMNFWGDHYVLTGLSPQL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2399 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi06g2399 273 MobiDBLite consensus disorder prediction 117 180 - -
Mibi06g2399 273 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi06g2399 273 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi06g2399 273 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Mibi06g2399 273 Gene3D - 69 140 - -
Mibi06g2399 273 MobiDBLite consensus disorder prediction 156 180 - -
Mibi06g2399 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi06g2399 273 Gene3D - 13 66 - -
Mibi06g2399 273 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi06g2399 273 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi06g2399 273 MobiDBLite consensus disorder prediction 117 142 - -
Mibi06g2399 273 SMART sant 66 114 IPR001005 -
Mibi06g2399 273 SMART sant 13 63 IPR001005 -
Mibi06g2399 273 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mibi06g2399 273 FunFam MYB-related transcription factor 13 66 - -
Mibi06g2399 273 CDD SANT 16 61 IPR001005 -
Mibi06g2399 273 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2399 Mibi-ChrMibi06 44244599 44246564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2399 1 251 MYB Transcription Factor Family AT2G31180 47.810 1.66e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g2399 Myb_DNA-binding 1.5e-13 CL0123