Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2394 ATGGGTCTGAGAGACATAGGGGCATCACTTCCTCCAGGGTTTCGTTTCTATCCGAGCGATGAGGAGCTGGTGTGTCATTATCTGTACAAGAAGATCGCCAATGAGGAAATCCTCAAAGGCACTTTGGTCGAAATTGACTTGCATACTTGCGAACCATGGCAACTTCCTGAGGTGGCAAAGCTGAACGCAAACGAATGGTATTTCTTCAGCTTCCGTGACCGTAAATACGCCACAGGTTTCCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGCTGGACCCAATCACACGCGAGGTTGTAGGGATGAGGAAGACGCTTGTGTTCTACAGGAACCGAGCCCCCAATGGCATGAAAACTGGTTGGATCATGCATGAATTTCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAAGCAGAGCAGAAAACAATGGGAAACTCAGCCCATCACAGGATATGTTATTTGAGACTGCACCTTCATATACTTTGCCTTCTTCATCTCCAACCAATCAAATTCAGCCACCTGGCTTCACCCAGTTCACCTCCATTATGCCAACCCATGATTACCAATACCAGAATCAAACAAGTTCTCTAATGAATCTCCTTCAATTCTCTAGGGAAACAAACACCAACCACACTAATAGTAATGTCACCCAGATTATTCCAAGAGGAGATCATGTTGGATATGAAGATGGGTTCTTATGGGACATGGACCTGGAAGAAAATAGCATCCACCGCCACGATGACGTGGCATCACACCAGGACAGAATGGGATTCGAGGTTGATAATGACAGTATGGTCTTGTTATAA 864 0.4676 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIANEEILKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPITREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRAENNGKLSPSQDMLFETAPSYTLPSSSPTNQIQPPGFTQFTSIMPTHDYQYQNQTSSLMNLLQFSRETNTNHTNSNVTQIIPRGDHVGYEDGFLWDMDLEENSIHRHDDVASHQDRMGFEVDNDSMVLL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2394 287 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Mibi06g2394 287 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Mibi06g2394 287 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Mibi06g2394 287 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Mibi06g2394 287 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2394 Mibi-ChrMibi06 44159718 44163178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2394 6 157 NAC Transcription Factor Family AT1G56010 58.750 2.22e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g2394 NAM 1.2e-37 No_clan