Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2389 ATGGATTCCGCGAGGAGCTGGTTGCAAAAGTTACAACCACGAGATAAAATGAGGACATCGTCAAAGAAAAAGGAGGATAGTGCTGGAGAAGATCCAAATCAACCGGCAGATGAAGAAGCTCTTTCCAGCACCACAAAACAGAAGGTTGCTGCAGCCAAGCAGTACATTGAGAACCATTACAAGGAGCAAATGAAGAGCCTTCAGGAGAGAAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCCGATGCTGATGTCTCAGAGGAAGATCAAAACAACCTTCTTAAGTTTCTGGAGAAGAAGGAAACAGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATCGGAAAAGGTGCATTTGGAGAGGTCAGGGTCTGCAGGGAAAAGACGACAGGAAGTGTTTATGCAATGAAAAAGCTAAAGAAATCCGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGTATAGTCAAACTTTATTGCTCTTTCCAGGATGATGAGTATCTGTATCTTATCATGGAGTATCTTCCTGGTGGGGATATGATGACCCTTCTTATGAGAAAGGATACCTTGACCGAAGATGAGGCCAGATTTTATGTAGCTGAAACAGTTCTGGCTATTGAATCTATTCATAAACACAATTATATCCACCGGGATATCAAGCCTGATAATTTGTTACTTGATAAATATGGACACTTGAAACTTTCAGATTTCGGACTATGTAAGCCATTAGATTGCAGCACGCTTCAAGAAGATGATTTTTCAGTAGGTCAGAATGCAAATGGATCTACACAGAATGATGAACGGTCAGCTCCAAAGCGCACACAACTAGAAAAATTACAGCACTGGCAAAAGAACAGAAGAACACTTGCATATTCTACTGTTGGCACACCTGATTATATTGCCCCAGAAGTTCTTTTGAAGAAAGGCTATGGAATGGAATGTGACTGGTGGTCCCTTGGAGCTATTATGTATGAAATGTTGGTGGGGTATCCTCCTTTTTATTCAGATGATCCAATGTCAACATGTAGAAAGATAGTGAATTGGAAATCTCACTTGAAGTTTCCAGAAGAGGCAAGGCTATCTCCAGAGGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTCAACCACAGACTAGGGTCAAATGGTGCTGATGAAATTAAGGCTCATTCATTCTTCAAAGGTGTGGAATGGGATAGACTCTATCAAATGGAAGCTGCATTTATCCCTGAGGTCAACGATGAATTAGATACTCAGAATTTTGAAAAGTTTGAAGAGGCAGACATCCAGAATCATCAAGCAGCAAGATCTGGGCCTTGGAGAAAGATGCTCTCTTCTAAGGACTTGAATTTTGTTGGGTACACATACAAGAATTTTGAGATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAGAAATCGTCCAAACCAAAGAGGCCATCTATCAAGTCACTTTTTGAGGGTGAGTCAGAAACATCAGAGGTGTCTGCTTCGTCAGATGTGCCGCCTGCAGGCAATCAATCTGCTCAAGGGAGCTTTCTGAGCCTCTTGCCACCCCGTTATGAGGTATCTCATAAAGATAAAAGAACCTCCTAA 1674 0.4164 MDSARSWLQKLQPRDKMRTSSKKKEDSAGEDPNQPADEEALSSTTKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGSVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHNYIHRDIKPDNLLLDKYGHLKLSDFGLCKPLDCSTLQEDDFSVGQNANGSTQNDERSAPKRTQLEKLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVNHRLGSNGADEIKAHSFFKGVEWDRLYQMEAAFIPEVNDELDTQNFEKFEEADIQNHQAARSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKSSKPKRPSIKSLFEGESETSEVSASSDVPPAGNQSAQGSFLSLLPPRYEVSHKDKRTS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2389 557 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi06g2389 557 CDD STKc_NDR_like 116 480 - -
Mibi06g2389 557 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mibi06g2389 557 MobiDBLite consensus disorder prediction 497 511 - -
Mibi06g2389 557 MobiDBLite consensus disorder prediction 1 48 - -
Mibi06g2389 557 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Mibi06g2389 557 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2389 557 MobiDBLite consensus disorder prediction 496 557 - -
Mibi06g2389 557 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 474 - -
Mibi06g2389 557 MobiDBLite consensus disorder prediction 512 540 - -
Mibi06g2389 557 SMART serkin_6 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2389 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Mibi06g2389 557 Gene3D Transferase(Phosphotransferase) domain 1 204 433 - -
Mibi06g2389 557 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Mibi06g2389 557 Gene3D Phosphorylase Kinase; domain 1 108 203 - -
Mibi06g2389 557 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi06g2389 557 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Mibi06g2389 557 MobiDBLite consensus disorder prediction 9 31 - -
Mibi06g2389 557 ProSiteProfiles Protein kinase domain profile. 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2389 557 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Mibi06g2389 557 SUPERFAMILY Protein kinase-like (PK-like) 91 468 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2389 Mibi-ChrMibi06 44105218 44111288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2389 1 512 AGC Kinase Gene Family AT2G20470 79.191 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mibi06g2389 Pkinase 4.9e-65 CL0016