Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g2388 ATGGATCATGTGATTGCCGGCAAATTTAAACTCGGAAGGAAAATTGGGAGTGGATCTTTTGGAGAGCTTTATTTAGGTGTTAACGTACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGAGCAGGCATCCACAGCTTCATTATGAATCAAAATTATATATGCTTCTTCAAGGAGGAACGGGGATTCCTCACCTCAAGTGGTTTGGAATTGAGGGAGAGTACAATGTCATGGTTATTGACCTTCTCGGGCCAAGTTTAGAAGATTTGTTCAACTATTGCAACCGGAAGTTCAGTTTAAAGACAGTGTTGATGCTTGCTGATCAATGTATTAACAGAGTTGAATATATGCATTCAAGAGGATTTCTTCACCGTGACATAAAGCCTGACAATTTTTTAATGGGTCTTGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGGAAAGAAGTTTAGGGATCTACAGACTCATAAGCACATACCATACAGAGAAAACAAGAACCTTACTGGCACAGCTCGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAAGGTCTGAAGGCCGGCAATAAAAAACAGAAGTATGATAAGATCAGTGAGAAGAAATCATCAACTCCAATAGAGGTTCTCTGCAAATCATACCCATCTGAGTTCGTATCCTACTTCCACTACTGCCGATCATTACGGTTTGAGGACAAGCCAGATTATTCATATTTAAAGAGGCTCTTCCGAGACTTATTTATTAGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACCATATTGAAGTATCCTCAGATTGGCGGCAGCTCTAAAGGGCGGCTCGGCAATGGCAAGGCAGTTATGAATGCAGGTCCATCTGCACAAAAACCGGAAAAGATCCCAGCTGGGAAAGAGATTCGAGAGAAATTTTCTGGTGGTGTTGAAGCATTTTCCCGAAGGAATCCGACAAGTTCTAGTCCTCATGGTGATCTCACCAAAAATAGGATTTTTGAGGAGGTATCATCACGCAGGGATGTGTATGATCAAGAAAAGGGACGTAGTTCCTCTCGATATGGAAGCACTTCAAGAAAAGCCATAATCTCATCGAACCGGCAGAGTTCCTCCGGTGACCATACTGATGGCCGTGCTGGCTGGCTAACATCGGGTGCCAACCGCCCATCTAGTGCATATAGAACTCAAGCTGTGCATGAGACCAAACAACCAAGTTTTACGCGCAATACGTCTTCAAGAGCCAACCGTGAAGATGCACTCAGGAGCTTTGAGATGCTCTCTATTAGGAAGTAA 1380 0.4312 MDHVIAGKFKLGRKIGSGSFGELYLGVNVQTGEEVAVKLEPVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGIEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQCINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKSSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSKGRLGNGKAVMNAGPSAQKPEKIPAGKEIREKFSGGVEAFSRRNPTSSSPHGDLTKNRIFEEVSSRRDVYDQEKGRSSSRYGSTSRKAIISSNRQSSSGDHTDGRAGWLTSGANRPSSAYRTQAVHETKQPSFTRNTSSRANREDALRSFEMLSIRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g2388 459 FunFam Putative Casein kinase I 1 85 - -
Mibi06g2388 459 MobiDBLite consensus disorder prediction 338 459 - -
Mibi06g2388 459 MobiDBLite consensus disorder prediction 443 459 - -
Mibi06g2388 459 Gene3D Transferase(Phosphotransferase) domain 1 1 329 - -
Mibi06g2388 459 MobiDBLite consensus disorder prediction 378 406 - -
Mibi06g2388 459 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2388 459 MobiDBLite consensus disorder prediction 309 328 - -
Mibi06g2388 459 SMART serkin_6 9 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2388 459 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mibi06g2388 459 MobiDBLite consensus disorder prediction 342 356 - -
Mibi06g2388 459 MobiDBLite consensus disorder prediction 357 377 - -
Mibi06g2388 459 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g2388 459 FunFam Casein kinase 1-like protein 1 330 - -
Mibi06g2388 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mibi06g2388 459 PANTHER CASEIN KINASE-RELATED 9 375 - -
Mibi06g2388 459 MobiDBLite consensus disorder prediction 413 442 - -
Mibi06g2388 459 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mibi06g2388 459 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g2388 Mibi-ChrMibi06 44096022 44100989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g2388 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 4.23e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mibi06g2388 Pkinase 1.3e-24 CL0016